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RTP_082018_0_1um_scaffold_2903

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_2903_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..619)
DNA (618bp) protein (206aa)
chromosome partitioning protein ParB n=1 Tax=Segetibacter koreensis RepID=UPI0003697432
parB-like partition protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(623..1423)
DNA (801bp) protein (267aa)
chromosome partitioning protein ParA n=1 Tax=Segetibacter koreensis RepID=UPI0003665C1D
chromosome partitioning protein ParA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1426..2718
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382C2F5
metallophosphoesterase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2715..2990)
DNA (276bp) protein (92aa)
RNA methyltransferase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B14C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3349..3630
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003762243
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3627..5843)
DNA (2217bp) protein (739aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B875D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5850..7688)
DNA (1839bp) protein (613aa)
glutamine amidotransferase n=1 Tax=Segetibacter koreensis RepID=UPI000367F5C9
glutamine--fructose-6-phosphate transaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7845..8375
DNA (531bp) protein (177aa)
phosphoglycerate mutase family protein n=1 Tax=Pedobacter agri RepID=UPI000299F742
phosphoglycerate mutase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8409..9188
DNA (780bp) protein (260aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9203..10378)
DNA (1176bp) protein (392aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y897_9SPHI
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10442..12637
DNA (2196bp) protein (732aa)
Catalase-peroxidase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEQ7_9BACT
catalase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_12
unknown

Not on your lists

12595..12729
DNA (135bp) protein (45aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_2903_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12730..13350
DNA (621bp) protein (207aa)
Sensory box histidine kinase/response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EK11_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13370..14005
DNA (636bp) protein (212aa)
Peptidyl-prolyl cis-trans isomerase A n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ATV2_MARSH
peptidyl-prolyl cis-trans isomerase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14002..14493)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000367C166
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14539..15222)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035E52E9
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15233..15775)
DNA (543bp) protein (181aa)
YceI family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX3_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15894..16754
DNA (861bp) protein (287aa)
UbiA prenyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIE5_NIAKG
UbiA prenyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16747..17841
DNA (1095bp) protein (365aa)
Naringenin-chalcone synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIE6_NIAKG
Naringenin-chalcone synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17834..18553
DNA (720bp) protein (240aa)
3-demethylubiquinone-9 3-O-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIE7_NIAKG
3-demethylubiquinone-9 3-methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18546..19682
DNA (1137bp) protein (379aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIE8_NIAKG
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19683..21212)
DNA (1530bp) protein (510aa)
Peptidase dimerization domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER18_EMTOG
peptidase dimerization domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21209..22171)
DNA (963bp) protein (321aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SD80_9FLAO
Fic protein family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_24
unknown

Not on your lists

comp(22214..22567)
DNA (354bp) protein (118aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_2903_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22586..22969)
DNA (384bp) protein (128aa)
Death on curing protein, Doc toxin n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZV81_9BACT
death-on-curing family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22966..23154)
DNA (189bp) protein (63aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23229..23858)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000363FC7D
methyltransferase type 11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23869..24159)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1L772_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24709..25023)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region id=4500796 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
DNA polymerase beta domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2903_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25007..25408)
DNA (402bp) protein (134aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 38 in total

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