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RTP_082018_0_1um_scaffold_3607

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_3607_trna_1
unknown

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95..167
DNA (73bp)
transferRNA Lys
RTP_082018_0_1um_scaffold_3607_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(425..853)
DNA (429bp) protein (143aa)
Rrf2-like transcriptional regulator protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WR71_9BACT
BadM/Rrf2 family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(834..2210)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037BF9DA
Cbb3-type cytochrome oxidase subunit 1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2191..2592)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003758718
cytochrome C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2664..4943
DNA (2280bp) protein (760aa)
nitric-oxide reductase id=3235756 bin=GWF2_Bacteroidetes_41_9 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
nitric-oxide reductase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5052..5426
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00037B5926
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5430..5888
DNA (459bp) protein (153aa)
Thioesterase superfamily protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TUH8_MARTH
thioesterase superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5898..7145
DNA (1248bp) protein (416aa)
Peptidase U32 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPD2_EMTOG
peptidase U32
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_8
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7138..7359
DNA (222bp) protein (74aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCM3_9SPHI
Ferredoxin {ECO:0000313|EMBL:KJS05941.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
4fe-4S ferredoxin iron-sulfur binding domain-containing protein
RTP_082018_0_1um_scaffold_3607_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7356..7784
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030BCBD9
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7793..9598
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXP9_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9605..10978)
DNA (1374bp) protein (458aa)
tnaA; L-cysteine desulfhydrase (EC:4.1.99.1)
Tryptophanase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRA8_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11083..11418)
DNA (336bp) protein (112aa)
isoquinoline 1-oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CF300
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11384..12085)
DNA (702bp) protein (234aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUL7_EMTOG
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_3607_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12060..12584)
DNA (525bp) protein (175aa)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EN51_RUNSL
aldehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 15 items

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