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FFSP_062018_mid_0_1um_scaffold_1099

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_062018_mid_0_1um_scaffold_1099_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..697
DNA (696bp) protein (232aa)
cytochrome oxidase subunit I n=1 Tax=Thiobacillus denitrificans RepID=UPI000372621E
cytochrome c oxidase cbb3-type subunit I
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

709..1314
DNA (606bp) protein (202aa)
Cytochrome C oxidase, mono-heme subunit/FixO n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL24_THIDA
cytochrome C oxidase, mono-heme subunit/FixO
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1325..1492
DNA (168bp) protein (56aa)
cytochrome C oxidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036163F6
cytochrome c oxidase subunit CcoQ
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_062018_mid_0_1um_scaffold_1099_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1489..2409
DNA (921bp) protein (307aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL26_THIDA
cytochrome c oxidase cbb3-type subunit III
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2518..3933
DNA (1416bp) protein (472aa)
Probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein id=1337109 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
iron-sulfur 4Fe-4S ferredoxin transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3955..4479
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F8E36
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4481..4615
DNA (135bp) protein (45aa)
id=12498093 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4694..4993
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036918FE
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5033..5590)
DNA (558bp) protein (186aa)
Transcriptional regulator PyrR, putative id=1321838 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator PyrR
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_062018_mid_0_1um_scaffold_1099_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5786..8089
DNA (2304bp) protein (768aa)
PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC40_9PROT
PAS sensor diguanylate cyclase and phophodiesterase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_1099_11
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..8619)
DNA (315bp) protein (105aa)
Chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor id=3847745 bin=GWC2_Syntrophus__56_31 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Syntrophus_56_31_curated
Displaying 11 items

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