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FFSP_062018_mid_0_1um_scaffold_2080

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_062018_mid_0_1um_scaffold_2080_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..181
DNA (180bp) protein (60aa)
50S ribosomal protein L16 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037534F1
rplP; 50S ribosomal protein L16
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


185..379
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003605A82
50S ribosomal protein L29
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


376..639
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Thiobacillus denitrificans RepID=UPI000380BF60
rpsQ; 30S ribosomal protein S17
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


808..1176
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=1336995 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplN; 50S ribosomal protein L14
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1185..1508
DNA (324bp) protein (108aa)
50S ribosomal protein L24 id=1336996 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L24
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_062018_mid_0_1um_scaffold_2080_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1511..2050
DNA (540bp) protein (180aa)
50S ribosomal protein L5 id=1336997 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplE; 50S ribosomal protein L5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2058..2363
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4C51
rpsN; 30S ribosomal protein S14
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2377..2772
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C5C8A
30S ribosomal protein S8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2785..3315
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003631E9D
rplF; 50S ribosomal protein L6
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3332..3685
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thiobacillus thioparus RepID=UPI000363996E
50S ribosomal protein L18
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3701..4216
DNA (516bp) protein (172aa)
30S ribosomal protein S5 id=1337002 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsE; 30S ribosomal protein S5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4220..4405
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL30_THIDA
rpmD; 50S ribosomal protein L30
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_2080_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4406..4840
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FF3BF
50S ribosomal protein L15
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_062018_mid_0_1um_scaffold_2080_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4859..5416
DNA (558bp) protein (186aa)
Protein translocase subunit SecY n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLM9_THIDA
secY; preprotein translocase subunit SecY
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 14 items

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