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FFSP_062018_mid_0_1um_scaffold_658

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_062018_mid_0_1um_scaffold_658_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

FFSP_062018_mid_0_1um_scaffold_658_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(277..1047)
DNA (771bp) protein (257aa)
Thiol:disulfide interchange protein DsbG n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF75_THIDA
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAO35043.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
dsbG; disulfide isomerase/thiol-disulfide oxidase
FFSP_062018_mid_0_1um_scaffold_658_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1082..1648)
DNA (567bp) protein (189aa)
Putative thiol:disulfide interchange protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF74_THIDA
thiol:disulfide interchange protein
Putative thiol:disulfide interchange protein {ECO:0000313|EMBL:AAZ98741.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_062018_mid_0_1um_scaffold_658_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1655..2482)
DNA (828bp) protein (276aa)
Probable thiol:disulfide interchange protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF73_THIDA
Thiol:disulfide interchange protein {ECO:0000313|EMBL:GAO35042.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
thiol:disulfide interchange protein
FFSP_062018_mid_0_1um_scaffold_658_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2487..4271)
DNA (1785bp) protein (595aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Thiol:disulfide interchange protein DsbD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF72_THIDA
FFSP_062018_mid_0_1um_scaffold_658_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..5046
DNA (666bp) protein (222aa)
Two component Transcriptional regulator, Winged helix family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF71_THIDA
two component transcriptional regulator
Two component Transcriptional regulator, Winged helix family {ECO:0000313|EMBL:AAZ98744.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_062018_mid_0_1um_scaffold_658_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5043..6404
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF70_THIDA
periplasmic sensor signal transduction histidine kinase
FFSP_062018_mid_0_1um_scaffold_658_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6496..7278
DNA (783bp) protein (261aa)
enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] id=1371472 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_658_9
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7357..8418)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLJ6_ACCPU
Putative inner membrane protein {ECO:0000313|EMBL:EXI87502.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
FFSP_062018_mid_0_1um_scaffold_658_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8479..9135)
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKI9_THIDA
HAD family hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_658_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9173..10129)
DNA (957bp) protein (319aa)
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKJ0_THIDA
RNA polymerase sigma factor RpoS
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_658_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..11046)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D2641
peptidoglycan-binding protein LysM
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:AAZ96790.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_062018_mid_0_1um_scaffold_658_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..11723)
DNA (681bp) protein (227aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PIMT_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_658_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..11989)
DNA (282bp) protein (94aa)
surE; stationary phase survival protein SurE (EC:3.1.3.5 3.1.3.6 3.6.1.11)
stationary phase survival protein SurE n=1 Tax=Thiobacillus thioparus RepID=UPI000371C54F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 14 items

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