ggKbase home page

FFSP_062018_mid_0_1um_scaffold_794

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_062018_mid_0_1um_scaffold_794_trna_1
unknown

Not on your lists

95..168
DNA (74bp)
transferRNA Val
FFSP_062018_mid_0_1um_scaffold_794_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

340..2247
DNA (1908bp) protein (636aa)
Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=12495544 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2398..2862
DNA (465bp) protein (155aa)
Translation initiation factor IF-3 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK33_THIDA
translation initiation factor 3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3028..3225
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Thiobacillus RepID=RL35_THIDA
50S ribosomal protein L35
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3238..3597
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Thiobacillus thioparus RepID=UPI00035FA62E
rplT; 50S ribosomal protein L20
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3683..4702
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI000382E529
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4719..7064
DNA (2346bp) protein (782aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000373E3B5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7096..7407
DNA (312bp) protein (104aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035FDC03
ihfA; integration host factor subunit alpha
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7385..7750
DNA (366bp) protein (122aa)
Transcriptional Regulator, MerR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK27_THIDA
MerR family transcriptional regulator
Transcriptional Regulator, MerR family {ECO:0000313|EMBL:AAZ96967.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_062018_mid_0_1um_scaffold_794_trna_2
unknown

Not on your lists

7798..7871
DNA (74bp)
transferRNA Pro
FFSP_062018_mid_0_1um_scaffold_794_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..8596
DNA (585bp) protein (195aa)
superoxide dismutase, Fe (EC:1.15.1.1)
Superoxide dismutase id=1348719 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8674..9351)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DAC73
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9353..10069)
DNA (717bp) protein (239aa)
Putative lipoprotein id=1348716 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_062018_mid_0_1um_scaffold_794_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10066..10620)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379F8DF
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 14 items

View Taxonomy