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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 751-800 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_12384
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1127 bp 62.11 21.03 94.50
FFSP_062018_mid_0_1um_scaffold_8275
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1573 bp 61.16 24.79 79.34
FFSP_062018_mid_0_1um_scaffold_12901
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1092 bp 63.83 20.88 88.19
FFSP_062018_mid_0_1um_scaffold_5469
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2268 bp 57.76 20.90 86.11
FFSP_062018_mid_0_1um_scaffold_9633
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1386 bp 62.27 21.00 88.31
FFSP_062018_mid_0_1um_scaffold_13234
Species: Thiobacillus denitrificans (100%)
1 1069 bp 61.09 21.47 83.35
FFSP_062018_mid_0_1um_scaffold_11932
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1161 bp 65.63 16.80 76.49
FFSP_062018_mid_0_1um_scaffold_8300
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1571 bp 64.35 21.01 99.87
FFSP_062018_mid_0_1um_scaffold_14035
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1021 bp 64.15 21.45 94.61
FFSP_062018_mid_0_1um_scaffold_11684
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1181 bp 64.69 23.37 99.83
FFSP_062018_mid_0_1um_scaffold_11429
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1205 bp 68.96 17.05 99.83
FFSP_062018_mid_0_1um_scaffold_6625
Species: Thiobacillus denitrificans (100%)
1 1906 bp 61.75 20.93 99.95
FFSP_062018_mid_0_1um_scaffold_12929
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1090 bp 61.28 16.79 99.91
FFSP_062018_mid_0_1um_scaffold_12163
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1143 bp 53.46 16.27 66.67
FFSP_062018_mid_0_1um_scaffold_13257
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1067 bp 59.98 15.32 77.60
FFSP_062018_mid_0_1um_scaffold_13529
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1050 bp 56.00 18.71 46.57
FFSP_062018_mid_0_1um_scaffold_5772
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2158 bp 66.82 24.88 99.81
FFSP_062018_mid_0_1um_scaffold_9934
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1353 bp 54.32 23.84 37.92
FFSP_062018_mid_0_1um_scaffold_13790
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1034 bp 65.28 22.05 99.81
FFSP_062018_mid_0_1um_scaffold_14070
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1019 bp 60.55 23.85 99.80
FFSP_062018_mid_0_1um_scaffold_9428
Species: Thiobacillus denitrificans (100%)
1 1415 bp 63.53 17.81 99.86
FFSP_062018_mid_0_1um_scaffold_14079
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1018 bp 60.71 17.98 99.90
FFSP_062018_mid_0_1um_scaffold_4520
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2715 bp 65.60 19.56 99.89
FFSP_062018_mid_0_1um_scaffold_14081
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1018 bp 61.98 21.22 99.90
FFSP_062018_mid_0_1um_scaffold_12737
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1102 bp 67.88 19.06 99.91
FFSP_062018_mid_0_1um_scaffold_8372
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1561 bp 60.86 26.23 99.94
FFSP_062018_mid_0_1um_scaffold_9731
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1376 bp 65.26 20.17 87.21
FFSP_062018_mid_0_1um_scaffold_7780
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1655 bp 51.24 20.48 71.24
FFSP_062018_mid_0_1um_scaffold_9733
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1375 bp 53.09 13.53 96.44
FFSP_062018_mid_0_1um_scaffold_11772
Species: Thiobacillus denitrificans (100%)
1 1174 bp 63.37 14.57 90.20
FFSP_062018_mid_0_1um_scaffold_10854
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1256 bp 63.46 25.92 97.45
FFSP_062018_mid_0_1um_scaffold_10857
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1256 bp 64.73 26.04 99.84
FFSP_062018_mid_0_1um_scaffold_12250
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1136 bp 67.34 28.26 89.26
FFSP_062018_mid_0_1um_scaffold_6217
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 2017 bp 61.97 18.89 94.30
FFSP_062018_mid_0_1um_scaffold_9500
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1404 bp 63.82 18.27 93.38
FFSP_062018_mid_0_1um_scaffold_9245
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1436 bp 62.67 19.32 99.86
FFSP_062018_mid_0_1um_scaffold_8673
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1514 bp 62.09 17.83 99.87
FFSP_062018_mid_0_1um_scaffold_12531
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1116 bp 64.96 20.43 99.73
FFSP_062018_mid_0_1um_scaffold_10374
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1306 bp 62.71 13.21 99.92
FFSP_062018_mid_0_1um_scaffold_10123
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1332 bp 65.17 21.17 100.00
FFSP_062018_mid_0_1um_scaffold_9776
Species: Thiobacillus denitrificans (100%)
1 1370 bp 63.87 24.31 99.85
FFSP_062018_mid_0_1um_scaffold_7313
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1751 bp 68.13 19.45 99.89
FFSP_062018_mid_0_1um_scaffold_6498
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1940 bp 63.14 22.89 77.16
FFSP_062018_mid_0_1um_scaffold_13893
Species: Thiobacillus denitrificans (100%)
1 1029 bp 66.18 17.78 100.00
FFSP_062018_mid_0_1um_scaffold_7833
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1648 bp 60.68 21.57 99.76
FFSP_062018_mid_0_1um_scaffold_11568
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1191 bp 66.16 19.65 80.86
FFSP_062018_mid_0_1um_scaffold_9275
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1432 bp 64.94 19.27 99.93
FFSP_062018_mid_0_1um_scaffold_12811
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1097 bp 68.28 19.96 90.79
FFSP_062018_mid_0_1um_scaffold_7581
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1694 bp 65.70 23.82 99.88
FFSP_062018_mid_0_1um_scaffold_12048
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1152 bp 60.50 23.70 100.00
Displaying items 751-800 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.