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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 101-150 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_11429
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1205 bp 68.96 17.05 99.83
FFSP_062018_mid_0_1um_scaffold_11684
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1181 bp 64.69 23.37 99.83
FFSP_062018_mid_0_1um_scaffold_5772
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2158 bp 66.82 24.88 99.81
FFSP_062018_mid_0_1um_scaffold_13790
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1034 bp 65.28 22.05 99.81
FFSP_062018_mid_0_1um_scaffold_13966
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1025 bp 66.24 22.54 99.80
FFSP_062018_mid_0_1um_scaffold_14070
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1019 bp 60.55 23.85 99.80
FFSP_062018_mid_0_1um_scaffold_6580
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1918 bp 64.91 19.63 99.79
FFSP_062018_mid_0_1um_scaffold_10847
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1257 bp 60.46 21.12 99.76
FFSP_062018_mid_0_1um_scaffold_7833
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1648 bp 60.68 21.57 99.76
FFSP_062018_mid_0_1um_scaffold_11357
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1212 bp 57.51 15.10 99.75
FFSP_062018_mid_0_1um_scaffold_5503
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2256 bp 61.84 21.94 99.73
FFSP_062018_mid_0_1um_scaffold_12531
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1116 bp 64.96 20.43 99.73
FFSP_062018_mid_0_1um_scaffold_13194
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1071 bp 67.69 16.81 99.72
FFSP_062018_mid_0_1um_scaffold_5123
Species: Thiobacillus denitrificans (100%)
3 2417 bp 66.28 19.36 99.67
FFSP_062018_mid_0_1um_scaffold_7162
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1779 bp 62.45 14.00 99.66
FFSP_062018_mid_0_1um_scaffold_9192
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1442 bp 65.74 21.64 99.65
FFSP_062018_mid_0_1um_scaffold_13189
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1072 bp 63.99 18.47 99.63
FFSP_062018_mid_0_1um_scaffold_14368
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1003 bp 59.22 18.54 99.60
FFSP_062018_mid_0_1um_scaffold_1129
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (71.43%)
7 8480 bp 63.64 22.36 99.59
FFSP_062018_mid_0_1um_scaffold_11527
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1196 bp 60.37 21.07 99.58
FFSP_062018_mid_0_1um_scaffold_7080
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1796 bp 64.70 24.55 99.55
FFSP_062018_mid_0_1um_scaffold_2863
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 4099 bp 58.26 23.86 99.54
FFSP_062018_mid_0_1um_scaffold_4083
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2984 bp 60.86 21.57 99.53
FFSP_062018_mid_0_1um_scaffold_11045
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1239 bp 65.54 25.42 99.52
FFSP_062018_mid_0_1um_scaffold_5080
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2439 bp 67.69 25.22 99.51
FFSP_062018_mid_0_1um_scaffold_4757
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2573 bp 60.28 22.56 99.46
FFSP_062018_mid_0_1um_scaffold_5694
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 2187 bp 62.83 27.57 99.45
FFSP_062018_mid_0_1um_scaffold_7038
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1807 bp 62.92 22.91 99.45
FFSP_062018_mid_0_1um_scaffold_3265
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3648 bp 64.78 23.03 99.42
FFSP_062018_mid_0_1um_scaffold_4073
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2994 bp 58.32 17.33 99.40
FFSP_062018_mid_0_1um_scaffold_5442
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2276 bp 61.51 18.39 99.38
FFSP_062018_mid_0_1um_scaffold_6494
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1941 bp 65.79 28.67 99.38
FFSP_062018_mid_0_1um_scaffold_9483
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1407 bp 63.26 19.62 99.36
FFSP_062018_mid_0_1um_scaffold_3740
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3231 bp 64.38 22.79 99.35
FFSP_062018_mid_0_1um_scaffold_4177
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2911 bp 58.47 21.44 99.35
FFSP_062018_mid_0_1um_scaffold_5868
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 2129 bp 60.97 19.45 99.34
FFSP_062018_mid_0_1um_scaffold_4550
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2697 bp 60.77 26.14 99.33
FFSP_062018_mid_0_1um_scaffold_5045
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2453 bp 61.07 26.97 99.31
FFSP_062018_mid_0_1um_scaffold_8254
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1577 bp 60.62 22.73 99.30
FFSP_062018_mid_0_1um_scaffold_10568
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1284 bp 67.91 14.49 99.30
FFSP_062018_mid_0_1um_scaffold_8837
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 1493 bp 63.30 16.58 99.26
FFSP_062018_mid_0_1um_scaffold_3945
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 3089 bp 59.83 24.96 99.26
FFSP_062018_mid_0_1um_scaffold_9331
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1427 bp 61.39 26.07 99.23
FFSP_062018_mid_0_1um_scaffold_7738
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1663 bp 62.24 22.82 99.22
FFSP_062018_mid_0_1um_scaffold_3019
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3913 bp 67.06 21.62 99.21
FFSP_062018_mid_0_1um_scaffold_5860
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2132 bp 52.49 13.79 99.20
FFSP_062018_mid_0_1um_scaffold_2174
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
8 5205 bp 59.92 19.11 99.19
FFSP_062018_mid_0_1um_scaffold_4997
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2471 bp 59.21 20.40 99.19
FFSP_062018_mid_0_1um_scaffold_6406
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1966 bp 64.80 18.85 99.19
FFSP_062018_mid_0_1um_scaffold_2841
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 4120 bp 64.17 21.70 99.17
Displaying items 101-150 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.