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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 201-250 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_1648
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 6506 bp 61.40 26.28 88.81
FFSP_062018_mid_0_1um_scaffold_8422
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1553 bp 61.88 22.41 88.86
FFSP_062018_mid_0_1um_scaffold_993
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (70%)
10 9137 bp 59.77 22.62 88.88
FFSP_062018_mid_0_1um_scaffold_2865
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4094 bp 59.84 16.05 88.89
FFSP_062018_mid_0_1um_scaffold_6470
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1947 bp 60.66 18.95 88.91
FFSP_062018_mid_0_1um_scaffold_4974
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2480 bp 65.32 21.11 88.91
FFSP_062018_mid_0_1um_scaffold_2200
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 5165 bp 64.86 23.93 88.98
FFSP_062018_mid_0_1um_scaffold_4847
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 2528 bp 60.28 15.55 89.00
FFSP_062018_mid_0_1um_scaffold_4298
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 2829 bp 61.89 15.69 89.08
FFSP_062018_mid_0_1um_scaffold_14179
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1013 bp 64.26 13.03 89.14
FFSP_062018_mid_0_1um_scaffold_4102
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2968 bp 59.57 21.13 89.15
FFSP_062018_mid_0_1um_scaffold_2529
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4562 bp 62.21 25.38 89.17
FFSP_062018_mid_0_1um_scaffold_1513
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
7 6973 bp 63.32 26.27 89.23
FFSP_062018_mid_0_1um_scaffold_12250
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1136 bp 67.34 28.26 89.26
FFSP_062018_mid_0_1um_scaffold_4076
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2991 bp 64.89 21.26 89.27
FFSP_062018_mid_0_1um_scaffold_4402
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2772 bp 63.17 23.48 89.29
FFSP_062018_mid_0_1um_scaffold_2516
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (71.43%)
7 4588 bp 61.36 21.45 89.32
FFSP_062018_mid_0_1um_scaffold_5085
Order: Hydrogenophilales (66.67%)
6 2438 bp 59.06 18.21 89.34
FFSP_062018_mid_0_1um_scaffold_2632
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 4398 bp 64.76 22.37 89.36
FFSP_062018_mid_0_1um_scaffold_4577
Order: Hydrogenophilales (50%)
6 2679 bp 58.34 18.14 89.36
FFSP_062018_mid_0_1um_scaffold_7678
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1675 bp 63.22 15.04 89.37
FFSP_062018_mid_0_1um_scaffold_7562
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1698 bp 59.84 13.07 89.40
FFSP_062018_mid_0_1um_scaffold_3977
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3060 bp 63.46 25.20 89.41
FFSP_062018_mid_0_1um_scaffold_10354
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1308 bp 62.92 28.67 89.45
FFSP_062018_mid_0_1um_scaffold_2266
Species: GWE1_Thiobacillus_62_9_curated (83.33%)
6 5008 bp 63.26 24.17 89.62
FFSP_062018_mid_0_1um_scaffold_4558
Order: Hydrogenophilales (50%)
4 2691 bp 62.13 27.09 89.63
FFSP_062018_mid_0_1um_scaffold_5158
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2403 bp 63.80 22.35 89.64
FFSP_062018_mid_0_1um_scaffold_4694
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2610 bp 61.99 23.68 89.66
FFSP_062018_mid_0_1um_scaffold_534
Order: Hydrogenophilales (62.5%)
8 13373 bp 63.02 24.62 89.73
FFSP_062018_mid_0_1um_scaffold_1866
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (70%)
10 5924 bp 61.77 24.23 89.74
FFSP_062018_mid_0_1um_scaffold_2586
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4467 bp 60.96 24.98 89.86
FFSP_062018_mid_0_1um_scaffold_3003
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3931 bp 65.28 25.18 89.88
FFSP_062018_mid_0_1um_scaffold_3142
Order: Hydrogenophilales (85.71%)
7 3761 bp 59.59 23.93 89.90
FFSP_062018_mid_0_1um_scaffold_8540
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 1535 bp 63.06 23.65 89.90
FFSP_062018_mid_0_1um_scaffold_4031
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3026 bp 66.85 16.95 89.92
FFSP_062018_mid_0_1um_scaffold_2686
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 4327 bp 61.59 26.14 89.92
FFSP_062018_mid_0_1um_scaffold_8259
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1577 bp 58.59 23.11 89.98
FFSP_062018_mid_0_1um_scaffold_8212
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1583 bp 58.37 23.50 90.02
FFSP_062018_mid_0_1um_scaffold_830
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
10 10334 bp 56.91 23.51 90.02
FFSP_062018_mid_0_1um_scaffold_2628
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 4405 bp 65.63 22.54 90.03
FFSP_062018_mid_0_1um_scaffold_8325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1566 bp 63.79 15.71 90.04
FFSP_062018_mid_0_1um_scaffold_5252
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2365 bp 60.51 21.95 90.06
FFSP_062018_mid_0_1um_scaffold_2667
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4349 bp 63.55 23.73 90.09
FFSP_062018_mid_0_1um_scaffold_520
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (92.86%)
14 13613 bp 61.19 25.03 90.09
FFSP_062018_mid_0_1um_scaffold_2688
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 4322 bp 60.74 23.53 90.10
FFSP_062018_mid_0_1um_scaffold_11463
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1202 bp 58.40 16.72 90.10
FFSP_062018_mid_0_1um_scaffold_7763
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1658 bp 64.72 22.71 90.11
FFSP_062018_mid_0_1um_scaffold_5486
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 2263 bp 62.13 16.77 90.15
FFSP_062018_mid_0_1um_scaffold_1655
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
9 6488 bp 61.37 24.16 90.17
FFSP_062018_mid_0_1um_scaffold_5071
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2442 bp 61.63 20.58 90.17
Displaying items 201-250 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.