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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 251-300 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_4127
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2952 bp 63.21 20.73 85.67
FFSP_062018_mid_0_1um_scaffold_882
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 9904 bp 60.64 21.60 90.69
FFSP_062018_mid_0_1um_scaffold_6787
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1871 bp 53.55 18.12 73.60
FFSP_062018_mid_0_1um_scaffold_3699
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3264 bp 63.57 26.84 94.76
FFSP_062018_mid_0_1um_scaffold_5140
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2410 bp 64.73 25.15 98.46
FFSP_062018_mid_0_1um_scaffold_5654
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2201 bp 60.11 25.69 90.91
FFSP_062018_mid_0_1um_scaffold_3190
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3725 bp 58.82 22.11 92.62
FFSP_062018_mid_0_1um_scaffold_6025
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2079 bp 59.31 20.27 91.92
FFSP_062018_mid_0_1um_scaffold_4650
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 2635 bp 62.69 26.19 98.25
FFSP_062018_mid_0_1um_scaffold_4141
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2942 bp 64.51 23.81 85.35
FFSP_062018_mid_0_1um_scaffold_6287
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2000 bp 62.70 20.18 95.85
FFSP_062018_mid_0_1um_scaffold_2959
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3975 bp 58.31 24.64 88.60
FFSP_062018_mid_0_1um_scaffold_4144
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2941 bp 60.76 24.99 92.93
FFSP_062018_mid_0_1um_scaffold_3715
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3253 bp 58.22 25.82 97.02
FFSP_062018_mid_0_1um_scaffold_6548
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1925 bp 61.56 20.73 100.99
FFSP_062018_mid_0_1um_scaffold_5158
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2403 bp 63.80 22.35 89.64
FFSP_062018_mid_0_1um_scaffold_3977
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3060 bp 63.46 25.20 89.41
FFSP_062018_mid_0_1um_scaffold_2971
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3966 bp 62.48 25.72 92.59
FFSP_062018_mid_0_1um_scaffold_2717
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4286 bp 64.07 24.15 95.26
FFSP_062018_mid_0_1um_scaffold_4926
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2499 bp 64.51 22.75 97.24
FFSP_062018_mid_0_1um_scaffold_5424
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2280 bp 58.95 27.76 92.50
FFSP_062018_mid_0_1um_scaffold_2467
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4668 bp 52.59 25.84 88.62
FFSP_062018_mid_0_1um_scaffold_6309
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1994 bp 61.94 25.28 96.44
FFSP_062018_mid_0_1um_scaffold_3735
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3237 bp 61.51 24.84 84.52
FFSP_062018_mid_0_1um_scaffold_1910
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 5822 bp 62.92 27.21 90.79
FFSP_062018_mid_0_1um_scaffold_3225
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3683 bp 63.94 25.82 87.97
FFSP_062018_mid_0_1um_scaffold_3997
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3049 bp 57.79 19.97 95.15
FFSP_062018_mid_0_1um_scaffold_5950
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2103 bp 59.06 23.25 97.29
FFSP_062018_mid_0_1um_scaffold_4177
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2911 bp 58.47 21.44 99.35
FFSP_062018_mid_0_1um_scaffold_6580
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1918 bp 64.91 19.63 99.79
FFSP_062018_mid_0_1um_scaffold_3750
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 3224 bp 60.79 26.15 88.49
FFSP_062018_mid_0_1um_scaffold_4694
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2610 bp 61.99 23.68 89.66
FFSP_062018_mid_0_1um_scaffold_1161
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 8329 bp 62.36 23.16 81.08
FFSP_062018_mid_0_1um_scaffold_2233
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 5090 bp 63.97 25.61 97.49
FFSP_062018_mid_0_1um_scaffold_8787
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1499 bp 61.37 20.91 97.47
FFSP_062018_mid_0_1um_scaffold_2242
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 5065 bp 64.80 26.12 83.93
FFSP_062018_mid_0_1um_scaffold_9364
Order: Hydrogenophilales (50%)
4 1423 bp 55.80 19.08 62.68
FFSP_062018_mid_0_1um_scaffold_5716
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2179 bp 61.73 23.27 92.38
FFSP_062018_mid_0_1um_scaffold_4197
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2894 bp 61.13 19.75 91.02
FFSP_062018_mid_0_1um_scaffold_8540
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 1535 bp 63.06 23.65 89.90
FFSP_062018_mid_0_1um_scaffold_5216
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2377 bp 59.74 21.20 68.66
FFSP_062018_mid_0_1um_scaffold_3782
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
4 3203 bp 61.41 21.21 80.64
FFSP_062018_mid_0_1um_scaffold_10507
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1291 bp 55.46 13.94 80.87
FFSP_062018_mid_0_1um_scaffold_3787
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3201 bp 61.51 23.90 88.38
FFSP_062018_mid_0_1um_scaffold_3535
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3399 bp 65.20 23.43 98.94
FFSP_062018_mid_0_1um_scaffold_2014
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 5562 bp 63.66 22.60 96.60
FFSP_062018_mid_0_1um_scaffold_10256
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 1318 bp 56.45 19.58 94.92
FFSP_062018_mid_0_1um_scaffold_5233
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2373 bp 54.49 23.77 82.26
FFSP_062018_mid_0_1um_scaffold_7954
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (75%)
4 1627 bp 53.84 27.84 73.76
FFSP_062018_mid_0_1um_scaffold_2529
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4562 bp 62.21 25.38 89.17
Displaying items 251-300 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.