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RTP_092018_0_1um_scaffold_6862

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_6862_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1154
DNA (1152bp) protein (384aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FAE0E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1198..2079)
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WY68_METML
AraC family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2492..2764
DNA (273bp) protein (91aa)
XRE family transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262A37D
XRE family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2761..4110
DNA (1350bp) protein (450aa)
HipA N-terminal domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7T3_ACIDE
hipA; HipA-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4612..4818)
DNA (207bp) protein (69aa)
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12495384 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cold-shock DNA-binding protein family protein
Possible Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AAZ96808.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_6862_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5118..5423
DNA (306bp) protein (102aa)
PsiF repeat protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBD1_ACIET
hypothetical protein
PsiF repeat protein {ECO:0000313|EMBL:ACM31815.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
RTP_092018_0_1um_scaffold_6862_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6662
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F5C7A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6686..7246
DNA (561bp) protein (187aa)
elongation factor P n=1 Tax=Thiobacillus thioparus RepID=UPI0003809240
elongation factor P
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7273..7752)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FHA2_BURVI
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6862_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8079..8567
DNA (489bp) protein (163aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00037FCB3D
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 10 items

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