ggKbase home page

RTP_092018_0_1um_scaffold_12825

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_12825_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A7397
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Tax=CG_Rhodocyc_01
RTP_092018_0_1um_scaffold_12825_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..1499)
DNA (1095bp) protein (365aa)
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=12494399 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RND family efflux transporter MFP subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_12825_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1496..2098)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D28EB
putative TetR-type transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_12825_trna_1
unknown

Not on your lists

comp(2356..2429)
DNA (74bp)
transferRNA Pro
RTP_092018_0_1um_scaffold_12825_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2504..3355)
DNA (852bp) protein (284aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30)
octaprenyl diphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003805A8C
Octaprenyl diphosphate synthase {ECO:0000313|EMBL:GAO37757.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RTP_092018_0_1um_scaffold_12825_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3466..3777
DNA (312bp) protein (104aa)
50S ribosomal protein L21 id=1351372 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L21
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_12825_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3790..4053
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=1 Tax=Thiobacillus thioparus RepID=UPI000361730E
rpmA; 50S ribosomal protein L27
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_12825_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4149..4766
DNA (618bp) protein (206aa)
GTPase CgtA n=1 Tax=Thiobacillus thioparus RepID=UPI000369B421
obgE; GTPase ObgE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 8 items

View Taxonomy