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RTP_092018_0_1um_scaffold_154

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Displaying items 1-30 of 266 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_154_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2474
DNA (2472bp) protein (824aa)
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47G36_DECAR
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal {ECO:0000313|EMBL:AAZ46195.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal
RTP_092018_0_1um_scaffold_154_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2461..3402
DNA (942bp) protein (314aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47G37_DECAR
LuxR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_3
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3831..4844)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F384_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EDM46812.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola DG893.;"
hypothetical Protein
RTP_092018_0_1um_scaffold_154_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5138..5719)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DI51_METS0
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5931..7052
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7P218_9GAMM
phosphate-selective porin O and P
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7133..8404
DNA (1272bp) protein (424aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=1324202 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
twin-arginine translocation pathway signal
Tax=BJP_IG2103_Dechloromonas_63_51
RTP_092018_0_1um_scaffold_154_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8507..10099
DNA (1593bp) protein (531aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=1324201 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
inner-membrane translocator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_154_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10101..11207
DNA (1107bp) protein (369aa)
Probable ABC transporter, membrane spanning protein id=1324200 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
urea ABC transporter permease UrtC
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_154_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..12025
DNA (822bp) protein (274aa)
Urea ABC transporter, ATP-binding protein UrtD id=1324199 bin=GWE1_T_denit_62_9 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
urea ABC transporter ATP-binding protein UrtD
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_154_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12026..12718
DNA (693bp) protein (231aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=1324198 bin=GWE1_T_denit_62_9 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
urtE; ABC transporter ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_154_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12726..13586
DNA (861bp) protein (287aa)
Urease accessory protein UreD id=1324197 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Urease accessory protein UreD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13597..13899
DNA (303bp) protein (101aa)
ureA; urease subunit gamma (EC:3.5.1.5)
urease subunit gamma n=1 Tax=Methyloversatilis universalis RepID=UPI00037F01FA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13909..14214
DNA (306bp) protein (102aa)
Urease subunit beta id=1324195 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
urease, subunit beta
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_154_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14229..14447
DNA (219bp) protein (73aa)
Putative uncharacterized protein id=1324194 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14469..16208
DNA (1740bp) protein (580aa)
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha id=1324193 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16211..16723
DNA (513bp) protein (171aa)
Urease accessory protein UreE id=1324192 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ureE; urease accessory protein UreE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16720..17388
DNA (669bp) protein (223aa)
Urease accessory protein UreF id=1324191 bin=GWE1_T_denit_62_9 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ureF; urease accessory protein UreF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17385..18005
DNA (621bp) protein (207aa)
Urease accessory protein UreG id=1324190 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ureG; urease accessory protein UreG
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_19
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18186..18869)
DNA (684bp) protein (228aa)
FRG domain containing protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXM9_CUPNN
FRG domain-containing protein
FRG domain containing protein {ECO:0000313|EMBL:AEI82099.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
RTP_092018_0_1um_scaffold_154_20
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..19430)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXN0_CUPNN
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ38883.1}; TaxID=1262462 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica (type O:5) str. YE53/03.;"
RTP_092018_0_1um_scaffold_154_21
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..20841)
DNA (1206bp) protein (402aa)
Putative transcription regulator containing HTH domain n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNN1_AZOSU
putative transcription regulator containing HTH domain
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_092018_0_1um_scaffold_154_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20886..21170)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0DY01_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ78303.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
RTP_092018_0_1um_scaffold_154_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21401..23929)
DNA (2529bp) protein (843aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=12493415 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..24627)
DNA (702bp) protein (234aa)
ABC transporter, ATPase protein id=1326758 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24656..25282
DNA (627bp) protein (209aa)
acyl-CoA thioesterase I; K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5] id=12493413 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acyl-CoA thioesterase I
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25279..25662
DNA (384bp) protein (128aa)
UPF0225 protein Tbd_0687 id=1326756 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_154_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25750..26484)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB1EB
cyclic nucleotide-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_154_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26608..27003
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC3C9
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_154_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27207..27536
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DC2DD
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_154_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27589..27933
DNA (345bp) protein (115aa)
photosystem reaction center subunit H n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE011
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 266 in total

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