name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_092018_0_1um_scaffold_386_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..399
|
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase id=1329920 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
401..841
|
nitrogen utilization protein B n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E3448
NusB antitermination factor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
903..1856
|
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
thiamine monophosphate kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000365663B
|
|
RTP_092018_0_1um_scaffold_386_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1837..2325
|
phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A id=1371379 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2313..2810
|
CinA protein id=1371378 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
CinA protein
CinA protein {ECO:0000313|EMBL:AAZ98148.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_092018_0_1um_scaffold_386_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2879..3790)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003780B4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98149.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_092018_0_1um_scaffold_386_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3953..4990
|
Protein RecA id=1371376 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_092018_0_1um_scaffold_386_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4983..5447
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362BB10
regulatory protein RecX
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5553..6221
|
HflBKC-binding inner membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CACED
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6228..7055
|
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00037523B5
TatD related DNase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7039..7509)
|
hypothetical protein id=12497805 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7602..8216)
|
Putative uncharacterized protein id=1342783 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8213..8857)
|
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase id=1342782 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8850..9638)
|
dienelactone hydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI000364FE7D
dienelactone hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_15
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9741..10463
|
S4 domain protein n=1 Tax=uncultured beta proteobacterium RepID=Q2Z096_9PROT
S4 domain protein {ECO:0000313|EMBL:CAI78504.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
RNA-binding S4 domain-containing protein
|
|
RTP_092018_0_1um_scaffold_386_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10493..11323)
|
Putative uncharacterized protein id=1349294 bin=GWE1_T_denit_62_9 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_092018_0_1um_scaffold_386_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11434..12417)
|
Putative NAD/FAD-dependent oxidoreductase id=1319190 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
NAD/FAD-dependent oxidoreductase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_092018_0_1um_scaffold_386_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12532..12969)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FAFAA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12972..14261)
|
Putative integral membrane protein id=1319192 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integral membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14470..15384
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037152EB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15381..15926
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003821AC0
twin-arginine translocation pathway signal
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16068..16424
|
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHB1_NITSI
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16542..17726
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIV4_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_24
unknown
|
Not on your lists |
17742..18401
|
This feature has no annotations |
|
RTP_092018_0_1um_scaffold_386_25
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18398..19096
|
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW42199.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
hypothetical protein
|
|
RTP_092018_0_1um_scaffold_386_26
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19076..19636)
|
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
RTP_092018_0_1um_scaffold_386_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19847..20449)
|
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor id=1324497 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_092018_0_1um_scaffold_386_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20570..20824
|
hypothetical protein id=1324498 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_092018_0_1um_scaffold_386_29
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21313..23061
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIJ9_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36066.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_092018_0_1um_scaffold_386_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23230..24066)
|
Restriction endonuclease id=1324503 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
restriction endonuclease
Tax=GWE1_Thiobacillus_62_9_curated
|