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RTP_092018_0_1um_scaffold_822

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_822_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18..722
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003668F16
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

808..1743
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373042E
hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1755..2099)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A858B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..3552)
DNA (1443bp) protein (481aa)
DEAD/DEAH box helicase id=12497258 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DEAD/DEAH box helicase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3595..4353)
DNA (759bp) protein (253aa)
beta-lactamase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB63D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..5468)
DNA (1116bp) protein (372aa)
NlpBDapX family lipoprotein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CCE4D
lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5523..6398)
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000367EEE5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6692..7369
DNA (678bp) protein (226aa)
phosphoserine phosphatase (EC:3.1.3.3)
phosphoserine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FEDE3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7544..10084
DNA (2541bp) protein (847aa)
Putative esterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC1_THIDA
esterase
Putative esterase {ECO:0000313|EMBL:AAZ97965.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_822_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10319..11284
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC0_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11546..13441
DNA (1896bp) protein (632aa)
Probable potassium transport system protein kup n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9C4_9PROT
K+ transporter
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_092018_0_1um_scaffold_822_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13571..14146
DNA (576bp) protein (192aa)
electron transport complex RsxE subunit n=1 Tax=Thiobacillus thioparus RepID=UPI0003814AA2
RnfABCDGE type electron transport complex subunit A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14146..14697
DNA (552bp) protein (184aa)
electron transporter RnfB n=1 Tax=Thiobacillus denitrificans RepID=UPI00038266B7
electron transport complex protein RnfB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14694..16367
DNA (1674bp) protein (558aa)
electron transporter RnfC n=1 Tax=Thiobacillus denitrificans RepID=UPI00036006DA
electron transport complex protein RnfC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16367..17422
DNA (1056bp) protein (352aa)
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD id=12495628 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..18066
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361736F
RnfABCDGE type electron transport complex subunit G
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18063..18740
DNA (678bp) protein (226aa)
electron transporter RsxE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DCE4D
electron transport complex RsxE subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18751..19389
DNA (639bp) protein (213aa)
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18)
endonuclease IV n=1 Tax=Thiobacillus thioparus RepID=UPI00035F9333
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19398..19832
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EF0D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19962..21836
DNA (1875bp) protein (625aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003746ED4
response regulator receiver modulated diguanylate cyclase
Putative diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:AAZ97976.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_822_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21878..23440)
DNA (1563bp) protein (521aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] id=1320295 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23561..25021)
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase id=1320293 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25239..25565
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C77F7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25615..26049
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB38D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26075..26419)
DNA (345bp) protein (115aa)
RnfH n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D819A
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26416..26850)
DNA (435bp) protein (145aa)
cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DCD4F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26900..27349
DNA (450bp) protein (150aa)
SsrA-binding protein id=1320289 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
smpB; SsrA-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27967..29022
DNA (1056bp) protein (352aa)
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA849
tRNA 2-selenouridine synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29061..31199)
DNA (2139bp) protein (713aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E3965
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_822_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31440..33335)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361B2AB
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 79 in total

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