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FFSP_072018_bottom_0_1um_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_131_1
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83..982)
DNA (900bp) protein (300aa)
Metallophosphoesterase n=1 Tax=mine drainage metagenome RepID=T1BC13_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHD30821.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
metallophosphoesterase
FFSP_072018_bottom_0_1um_scaffold_131_2
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1228..1470)
DNA (243bp) protein (81aa)
Helix-turn-helix domain protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NY16_9RHOB
Helix-turn-helix XRE-family like protein {ECO:0000313|EMBL:KFZ90193.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
transcriptional regulator
FFSP_072018_bottom_0_1um_scaffold_131_3
unknown

Not on your lists

1763..3049
DNA (1287bp) protein (429aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_4
unknown

Not on your lists

3016..3807
DNA (792bp) protein (264aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_5
unknown

Not on your lists

3842..4639
DNA (798bp) protein (266aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4937..5692
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSE9_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72853.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
FFSP_072018_bottom_0_1um_scaffold_131_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5875..7974
DNA (2100bp) protein (700aa)
UPI0003D3D976 related cluster n=1 Tax=unknown RepID=UPI0003D3D976
ATPase AAA {ECO:0000313|EMBL:KDP87779.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
ATPase AAA
FFSP_072018_bottom_0_1um_scaffold_131_8
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7992..9485
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QXB6_9ZZZZ
hypothetical protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
FFSP_072018_bottom_0_1um_scaffold_131_9
Vibrio sp. HENC-03, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9747..10991
DNA (1245bp) protein (415aa)
Cobalamin biosynthesis CobT VWA domain protein n=1 Tax=Vibrio sp. HENC-03 RepID=K5VP24_9VIBR
Cobalamin biosynthesis CobT VWA domain protein {ECO:0000313|EMBL:EKM26612.1}; TaxID=992012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. HENC-03.;"
msfA; vHiSLR1, Sel1-like repeat protein
FFSP_072018_bottom_0_1um_scaffold_131_10
unknown

Not on your lists

11253..11429
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U9IH51_PSEAI
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_131_11
unknown

Not on your lists

11434..11799
DNA (366bp) protein (122aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_12
unknown

Not on your lists

12029..12685
DNA (657bp) protein (219aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_13
unknown

Not on your lists

12685..13746
DNA (1062bp) protein (354aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_131_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13773..14660
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RPE5_COMTE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHN65690.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
FFSP_072018_bottom_0_1um_scaffold_131_15
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14722..16323
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VCP3_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ33475.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;"
FFSP_072018_bottom_0_1um_scaffold_131_16

Not on your lists

16364..17866
DNA (1503bp) protein (501aa)
Transcriptional factor MdcH n=1 Tax=mine drainage metagenome RepID=E6PQ14_9ZZZZ
Transcriptional factor MdcH {ECO:0000313|EMBL:CBH97018.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
FFSP_072018_bottom_0_1um_scaffold_131_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18248..18592
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362200E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
FFSP_072018_bottom_0_1um_scaffold_131_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18741..19214
DNA (474bp) protein (158aa)
CreA family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMJ0_ACCPU
CreA family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_131_19

Not on your lists

19411..20508
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DJZ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98342.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
FFSP_072018_bottom_0_1um_scaffold_131_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20718..20909)
DNA (192bp) protein (64aa)
Possible Transcriptional Regulator n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIK2_THIDA
transcriptional regulator
Possible Transcriptional Regulator {ECO:0000313|EMBL:AAZ97526.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_131_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21320..21586
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=1325888 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_131_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21685..22236
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374F92C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_131_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22268..22504
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=1325890 bin=GWE1_T_denit_62_9 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_131_24
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23015..23899
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ17_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34544.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_131_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23956..24294
DNA (339bp) protein (113aa)
Uncharacterized protein id=1312412 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_131_26

Not on your lists

24291..25949
DNA (1659bp) protein (553aa)
Phosphoglucomutase {ECO:0000313|EMBL:CBI10728.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CBI10728.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphoglucomutase (EC:5.4.2.2)
phosphoglucomutase n=1 Tax=Thiobacillus thioparus RepID=UPI0003762DDB
FFSP_072018_bottom_0_1um_scaffold_131_27
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26162..26461)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIK0_GALCS
Fe-S oxidoreductase {ECO:0000313|EMBL:GAO35817.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_131_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26532..27155
DNA (624bp) protein (208aa)
phosphoribosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E408F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_131_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27456..28070)
DNA (615bp) protein (205aa)
cobalt transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003743D2B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_131_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28154..28951
DNA (798bp) protein (266aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glutamate racemase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380F024
Displaying items 1-30 of 50 in total

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