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FFSP_072018_bottom_0_1um_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_253_1
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2699)
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB93_NITMU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
FFSP_072018_bottom_0_1um_scaffold_253_2
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2725..4158)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003713605
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
FFSP_072018_bottom_0_1um_scaffold_253_3
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4155..4943)
DNA (789bp) protein (263aa)
major intrinsic protein; K06188 aquaporin Z id=14429410 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
major intrinsic protein
Tax=BJP_IG2158_Methylococcales_50_91
FFSP_072018_bottom_0_1um_scaffold_253_4
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4943..5794)
DNA (852bp) protein (284aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000370E3E6
Tax=BJP_IG2158_Methylococcales_50_91
FFSP_072018_bottom_0_1um_scaffold_253_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5804..7903)
DNA (2100bp) protein (700aa)
Glycogen debranching enzyme n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y683_THIV6
glycogen debranching protein
Tax=CG_Hydro_01
FFSP_072018_bottom_0_1um_scaffold_253_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7863..9683)
DNA (1821bp) protein (607aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9Y3_THIV6
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=CG_Rhodocyc_01
FFSP_072018_bottom_0_1um_scaffold_253_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(9720..10856)
DNA (1137bp) protein (379aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Glucose-6-phosphate isomerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LER4_CHLTF
FFSP_072018_bottom_0_1um_scaffold_253_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11126..12232
DNA (1107bp) protein (369aa)
phosoglucose isomerase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036D861B
bifunctional transaldolase / phosphoglucose isomerase
Tax=CG_Hydro_01
FFSP_072018_bottom_0_1um_scaffold_253_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12339..13712
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SYQ8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP79487.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_253_10
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14440
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KKQ4_SHEWM
hypothetical protein
Tax=CG_Delta_03
FFSP_072018_bottom_0_1um_scaffold_253_11
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..16113
DNA (1677bp) protein (559aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH34_THIV6
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AFL76302.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
FFSP_072018_bottom_0_1um_scaffold_253_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16298..17284
DNA (987bp) protein (329aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM21_SIDLE
6-phosphogluconate dehydrogenase, decarboxylating
Tax=CG_Hydro_01
FFSP_072018_bottom_0_1um_scaffold_253_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17294..18844
DNA (1551bp) protein (517aa)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E6K0_9GAMM
glucose-6-phosphate 1-dehydrogenase
Tax=CG_Hydro_01
FFSP_072018_bottom_0_1um_scaffold_253_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19838
DNA (1002bp) protein (334aa)
Glucose 6-kinase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBZ1_GEOBB
glucose 6-kinase
Tax=CG_Hydro_01
FFSP_072018_bottom_0_1um_scaffold_253_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19835..20071
DNA (237bp) protein (79aa)
Uncharacterized protein id=1344878 bin=GWE1_T_denit_62_9 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_253_16
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20088..20783)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGR5_9GAMM
SNARE associated protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
FFSP_072018_bottom_0_1um_scaffold_253_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20933..21415)
DNA (483bp) protein (161aa)
MerR family transcriptional regulator n=1 Tax=Acinetobacter sp. MDS7A RepID=UPI00036F5533
MerR family transcriptional regulator
Tax=CG_Rhodocyc_01
FFSP_072018_bottom_0_1um_scaffold_253_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21487..21837
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP
Mercuric ion transport protein
Tax=CG_Rhodocyc_01
FFSP_072018_bottom_0_1um_scaffold_253_19
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21850..22149
DNA (300bp) protein (100aa)
Periplasmic mercury ion-binding protein n=4 Tax=Pseudomonas aeruginosa RepID=B7SJN7_PSEAI
mercury transporter
Tax=BJP_IG2103_Rhodocyclales_63_50
FFSP_072018_bottom_0_1um_scaffold_253_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..23007
DNA (687bp) protein (229aa)
Organomercurial lyase n=1 Tax=Pseudomonas stutzeri RepID=Q52396_PSEST
Organomercurial lyase {ECO:0000313|EMBL:AAC38230.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
merB; organomercurial lyase
FFSP_072018_bottom_0_1um_scaffold_253_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23099..23470
DNA (372bp) protein (124aa)
Transcriptional regulator MerD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW4_9GAMM
Transcriptional regulator MerD {ECO:0000313|EMBL:EIL86805.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MerR family transcriptional regulator
FFSP_072018_bottom_0_1um_scaffold_253_22
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23467..24054
DNA (588bp) protein (196aa)
ECF subfamily RNA polymerase, sigma-24 subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0PXL5_9RHOO
rpoE; ECF subfamily RNA polymerase, sigma-24 subunit
ECF subfamily RNA polymerase, sigma-24 subunit {ECO:0000313|EMBL:BAL23207.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
FFSP_072018_bottom_0_1um_scaffold_253_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24222..25850
DNA (1629bp) protein (543aa)
Mercuric reductase MerA id=1311321 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
mercuric reductase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_253_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25897..26610
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000376F160
MerC mercury resistance protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
FFSP_072018_bottom_0_1um_scaffold_253_25
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26616..27437
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B69DEA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
FFSP_072018_bottom_0_1um_scaffold_253_26
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27434..28258
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000371EC12
Uncharacterized protein {ECO:0000313|EMBL:ELX11356.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_253_27
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28616..29311)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGR5_9GAMM
SNARE associated protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
FFSP_072018_bottom_0_1um_scaffold_253_28
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29387..29950)
DNA (564bp) protein (188aa)
MarR family transcriptional regulator n=1 Tax=Thauera sp. 28 RepID=N6YRE7_9RHOO
MarR family transcriptional regulator
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
FFSP_072018_bottom_0_1um_scaffold_253_29
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30063..30296
DNA (234bp) protein (78aa)
Thioredoxin n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z498_9RHOO
Thioredoxin {ECO:0000313|EMBL:ENO89387.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
thioredoxin
FFSP_072018_bottom_0_1um_scaffold_253_30
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30311..30787
DNA (477bp) protein (159aa)
Cytochrome c n=1 Tax=Thauera sp. 27 RepID=N6XNY6_9RHOO
cytochrome c'
Cytochrome c {ECO:0000313|EMBL:AJG14437.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
Displaying items 1-30 of 33 in total

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