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FFSP_072018_bottom_0_1um_scaffold_452

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_452_1
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
Putative uncharacterized protein id=1355127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_072018_bottom_0_1um_scaffold_452_2
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(515..1153)
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=1355128 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_072018_bottom_0_1um_scaffold_452_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1195..1974
DNA (780bp) protein (260aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase id=1355129 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_4
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2003..2893
DNA (891bp) protein (297aa)
DNA-damage-inducible protein D n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CS7_METCA
dinD; DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
FFSP_072018_bottom_0_1um_scaffold_452_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2899..4200
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035DFC8A
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
FFSP_072018_bottom_0_1um_scaffold_452_6
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4259..4492)
DNA (234bp) protein (78aa)
RelE/StbE family addiction module toxin id=12497287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_072018_bottom_0_1um_scaffold_452_7
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4536..4760
DNA (225bp) protein (75aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697DB2
putative addiction module antidote
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_072018_bottom_0_1um_scaffold_452_8
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4761..5153
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF7DD
death on curing protein
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_072018_bottom_0_1um_scaffold_452_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5191..6546
DNA (1356bp) protein (452aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003777C93
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_452_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6564..6779
DNA (216bp) protein (72aa)
hypothetical protein id=12494110 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41362.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
FFSP_072018_bottom_0_1um_scaffold_452_11
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7109
DNA (321bp) protein (107aa)
hypothetical protein id=12494109 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
FFSP_072018_bottom_0_1um_scaffold_452_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7106..7786
DNA (681bp) protein (227aa)
Putative uncharacterized protein id=1355366 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7815..8243)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1355367 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8411..9013)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003607F93
lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_452_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9010..9957)
DNA (948bp) protein (316aa)
ABC-type transport system periplasmic component id=1355369 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type transport system periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9947..10714)
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein id=1355370 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11808)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003672415
ABC transporter permease
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11805..12857)
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase id=1355372 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12838..13737)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96198.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_452_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14144..14818
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_452_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14883..15272)
DNA (390bp) protein (130aa)
Cyclic nucleotide-binding domain protein id=1312395 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cyclic nucleotide-binding domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_452_22
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16082..17821
DNA (1740bp) protein (580aa)
Sensor histidine kinase AruS {ECO:0000313|EMBL:ESS71559.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ESS71559.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
Sensor histidine kinase AruS n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BUN8_9GAMM
ATP-binding region, ATPase-like protein
FFSP_072018_bottom_0_1um_scaffold_452_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17821..18777
DNA (957bp) protein (319aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SK1_RHOFD
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_452_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18825..19646
DNA (822bp) protein (274aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLI1_NITSI
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
FFSP_072018_bottom_0_1um_scaffold_452_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19671..20444
DNA (774bp) protein (258aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1J2_9PROT
Crp/Fnr family transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
FFSP_072018_bottom_0_1um_scaffold_452_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20912..25063
DNA (4152bp) protein (1384aa)
NdvB n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI00037FC2C6
cyclic beta 1-2 glucan synthetase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_452_27
unknown

Not on your lists

25155..25226
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 27 items

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