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FFSP_072018_bottom_0_1um_scaffold_666

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_666_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
chaperonin GroEL (Hsp60, Cpn10); K04077 chaperonin GroEL id=12495965 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
molecular chaperone GroEL
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_666_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1039..1329)
DNA (291bp) protein (97aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES id=12494902 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
groES; co-chaperonin GroES
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_666_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..2801
DNA (1338bp) protein (446aa)
aminotransferase (EC:2.6.1.-)
Adenosylmethionine--8-amino-7-oxononanoate aminotransferase id=1367066 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_666_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2880..3542
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family id=1367065 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator, TetR family
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_666_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3539..4009
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A1EA0
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_666_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4016..5185
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037934ED
RND family efflux transporter MFP subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_666_7
unknown

Not on your lists

5264..6061
DNA (798bp) protein (266aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_666_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6058..6405
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368183C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_666_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6398..6973
DNA (576bp) protein (192aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000382B6A7
ABC transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_666_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7239..8753
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGV5_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35261.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_666_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8750..9757
DNA (1008bp) protein (336aa)
RND family efflux pump membrane fusion protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3Q7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO36235.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RND family efflux pump membrane fusion protein
FFSP_072018_bottom_0_1um_scaffold_666_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9754..10617
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC48_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO36234.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_666_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10614..11552
DNA (939bp) protein (313aa)
ABC transporter ATP-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKZ9_9PROT
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAN35264.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_666_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11549..12505
DNA (957bp) protein (319aa)
ABC transporter ATP-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA54_9PROT
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO36232.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter ATP-binding protein
FFSP_072018_bottom_0_1um_scaffold_666_15
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12502..13626
DNA (1125bp) protein (375aa)
ABC transporter membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGV8_9PROT
Membrane protein {ECO:0000313|EMBL:GAO36231.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter membrane protein
FFSP_072018_bottom_0_1um_scaffold_666_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13637..14764
DNA (1128bp) protein (376aa)
ABC transporter membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3R1_9PROT
ABC transporter membrane protein
ABC transporter permease {ECO:0000313|EMBL:GAO36230.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
FFSP_072018_bottom_0_1um_scaffold_666_17
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14766..15218
DNA (453bp) protein (151aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BDA98
cytochrome c class II
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
FFSP_072018_bottom_0_1um_scaffold_666_18
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15290..15874
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AL01_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35269.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_666_19
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15927..16355
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA55_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35270.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_666_20

Not on your lists

16352..17095
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=F8UHU6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:AEI30603.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
FFSP_072018_bottom_0_1um_scaffold_666_21
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

17211..18608
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739A91
patatin
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
FFSP_072018_bottom_0_1um_scaffold_666_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18644..19273
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AL04_9PROT
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO36222.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transcriptional regulator, TetR family
FFSP_072018_bottom_0_1um_scaffold_666_23
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19485..19889
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA55_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
FFSP_072018_bottom_0_1um_scaffold_666_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19894..20049
DNA (156bp) protein (52aa)
metallo-beta-lactamase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DFF05
metallo-beta-lactamase superfamily protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:AAZ96048.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_666_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20025..21041
DNA (1017bp) protein (339aa)
metallo-beta-lactamase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DFF05
metallo-beta-lactamase superfamily protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_666_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21051..22118
DNA (1068bp) protein (356aa)
phospholipase (EC:3.1.1.32)
Phospholipase {ECO:0000313|EMBL:AAZ96049.1}; EC=3.1.1.32 {ECO:0000313|EMBL:AAZ96049.1};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003605713
FFSP_072018_bottom_0_1um_scaffold_666_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22168..22386)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000381D08A
Uncharacterized protein {ECO:0000313|EMBL:EIJ34995.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_666_28
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22383..22811)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T471_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23808.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
FFSP_072018_bottom_0_1um_scaffold_666_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22945..23799)
DNA (855bp) protein (285aa)
Serine protease, trypsin family id=1321830 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
serine protease
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_666_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23814..25094
DNA (1281bp) protein (427aa)
UDP-glucose/GDP-mannose dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] id=12495959 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
UDP-glucose/GDP-mannose dehydrogenase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 58 in total

View Taxonomy