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FFSP_072018_bottom_0_1um_scaffold_953

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_953_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
Hemin receptor, TonB-dependent outer membrane uptake protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFR2_THIDA
hemin receptor , TonB-dependent outer membrane uptake protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
FFSP_072018_bottom_0_1um_scaffold_953_2
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..556)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036C7300
predicted nucleic-acid-binding protein containing PIN domain
Predicted nucleic-acid-binding protein containing PIN domain {ECO:0000313|EMBL:BAO84623.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
FFSP_072018_bottom_0_1um_scaffold_953_3
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..813)
DNA (261bp) protein (87aa)
Transcriptional regulator, AbrB family protein n=1 Tax=mine drainage metagenome RepID=T0YDJ3_9ZZZZ
regulator of stationary/sporulation gene expression
Regulator of stationary/sporulation gene expression {ECO:0000313|EMBL:BAO84624.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
FFSP_072018_bottom_0_1um_scaffold_953_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

884..1864
DNA (981bp) protein (327aa)
Periplasmic component of ABC-type transport system n=1 Tax=Thauera phenylacetica B4P RepID=N6Z413_9RHOO
periplasmic component of ABC-type transport system
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
FFSP_072018_bottom_0_1um_scaffold_953_5
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1861..2391
DNA (531bp) protein (177aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VEA0_PSEST
Sulfonate ABC transporter permease {ECO:0000313|EMBL:EXF42851.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
binding-protein-dependent transport system inner membrane protein
FFSP_072018_bottom_0_1um_scaffold_953_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2358..2474
DNA (117bp) protein (39aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VEA0_PSEST
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EMD98302.1}; TaxID=1212548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
FFSP_072018_bottom_0_1um_scaffold_953_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2471..3313
DNA (843bp) protein (281aa)
ATPase component ABC-type transport system n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X0_AROAE
ATPase component ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
FFSP_072018_bottom_0_1um_scaffold_953_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3307..4548
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X1_AROAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
FFSP_072018_bottom_0_1um_scaffold_953_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4735..6087
DNA (1353bp) protein (451aa)
Putative uncharacterized protein id=1341272 bin=GWE1_T_denit_62_9 species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6503..7273
DNA (771bp) protein (257aa)
Periplasmic protein TonB id=1317132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic protein TonB
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7277..8029
DNA (753bp) protein (251aa)
MotA/TolQ/ExbB proton channel family protein id=1317131 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MotA/TolQ/ExbB proton channel family protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8029..8451
DNA (423bp) protein (141aa)
Putative biopolymer transport protein id=1317130 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
biopolymer transport protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8559..10787
DNA (2229bp) protein (743aa)
TonB-dependent receptor n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U1N6_ALCXX
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
TonB-dependent receptor {ECO:0000313|EMBL:EFV87152.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
FFSP_072018_bottom_0_1um_scaffold_953_14
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10784..11257
DNA (474bp) protein (158aa)
Thioredoxin {ECO:0000313|EMBL:KDE38988.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
FFSP_072018_bottom_0_1um_scaffold_953_15
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11283..12812
DNA (1530bp) protein (510aa)
Small GTP-binding protein domain n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H57_DECAR
small GTP-binding protein domain-containing protein
Tax=BJP_IG2103_Dechloromonas_60_92
FFSP_072018_bottom_0_1um_scaffold_953_16
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12858..13220
DNA (363bp) protein (121aa)
Ferrous iron transporter FeoB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFH4_AZOSU
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:AEV26040.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
FFSP_072018_bottom_0_1um_scaffold_953_17
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13217..13465
DNA (249bp) protein (83aa)
FeoA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H58_DECAR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
FFSP_072018_bottom_0_1um_scaffold_953_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13913..14575
DNA (663bp) protein (221aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=1359580 bin=GWE1_T_denit_62_9 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_19
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14995..16680
DNA (1686bp) protein (562aa)
Doubled CXXCH motif-containing protein n=1 Tax=Thauera sp. 28 RepID=N6ZAC6_9RHOO
cytochrome c family protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
FFSP_072018_bottom_0_1um_scaffold_953_20
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16673..17269
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7PB04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS91785.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
cytochrome B561
FFSP_072018_bottom_0_1um_scaffold_953_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17319..17711
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1X0_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31116.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
FFSP_072018_bottom_0_1um_scaffold_953_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17797..18459
DNA (663bp) protein (221aa)
Putative uncharacterized protein id=1349958 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18423..18608
DNA (186bp) protein (62aa)
Putative isomerase id=1349959 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
isomerase
Putative isomerase {ECO:0000313|EMBL:AAZ96655.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_953_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18701..20503
DNA (1803bp) protein (601aa)
excinuclease ABC subunit C n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D9D22
excinuclease ABC subunit C
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20510..21079
DNA (570bp) protein (190aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=1349961 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_trna_1
unknown

Not on your lists

21129..21201
DNA (73bp)
transferRNA Gly
FFSP_072018_bottom_0_1um_scaffold_953_trna_2
unknown

Not on your lists

21275..21345
DNA (71bp)
transferRNA Cys
FFSP_072018_bottom_0_1um_scaffold_953_trna_3
unknown

Not on your lists

21373..21456
DNA (84bp)
transferRNA Leu
FFSP_072018_bottom_0_1um_scaffold_953_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21578..22006
DNA (429bp) protein (143aa)
ribosome maturation protein RimP n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E98BF
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_953_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22024..25914
DNA (3891bp) protein (1297aa)
translation initiation factor IF-2 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C6BD1
translation initiation factor IF-2
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying items 1-30 of 34 in total

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