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FFSP_072018_bottom_0_1um_scaffold_1038

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_1038_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..253)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000379D617
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34659.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
FFSP_072018_bottom_0_1um_scaffold_1038_2
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428..892)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000367D795
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP88878.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
FFSP_072018_bottom_0_1um_scaffold_1038_3
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(889..2301)
DNA (1413bp) protein (471aa)
resolvase n=1 Tax=Cupriavidus sp. WS RepID=UPI000360FE93
resolvase domain-containing protein
Resolvase domain-containing protein {ECO:0000313|EMBL:BAP88879.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
FFSP_072018_bottom_0_1um_scaffold_1038_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2298..2771)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH34_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34662.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
FFSP_072018_bottom_0_1um_scaffold_1038_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3073..3933)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000373A9C4
Uncharacterized protein {ECO:0000313|EMBL:EIK89970.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_1038_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3942..4871)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWA7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98245.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
FFSP_072018_bottom_0_1um_scaffold_1038_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4885..5214)
DNA (330bp) protein (110aa)
Helix-turn-helix domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWA6_ALIDB
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADU98244.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
FFSP_072018_bottom_0_1um_scaffold_1038_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5459..6694
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWA5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98243.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
FFSP_072018_bottom_0_1um_scaffold_1038_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6698..7648
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWA4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98242.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
FFSP_072018_bottom_0_1um_scaffold_1038_trna_1
unknown

Not on your lists

comp(7915..7987)
DNA (73bp)
transferRNA Phe
FFSP_072018_bottom_0_1um_scaffold_1038_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8052..8351)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003776E77
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
FFSP_072018_bottom_0_1um_scaffold_1038_11
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8447..9034
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367427F
tetratricopeptide repeat protein
Tax=GWA2_Gallionellales_60_18_curated
FFSP_072018_bottom_0_1um_scaffold_1038_12
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9325..9549)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EC262
sodium symporter protein
Tax=GWA2_Gallionellales_60_18_curated
FFSP_072018_bottom_0_1um_scaffold_1038_13
unknown

Not on your lists

9667..9801
DNA (135bp) protein (45aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_1038_14
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10107..11210
DNA (1104bp) protein (368aa)
Tax=RBG_16_Gallionellales_56_9_curated
FFSP_072018_bottom_0_1um_scaffold_1038_15
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11150..11413)
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D9526
putative solute:sodium symporter small subunit
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
FFSP_072018_bottom_0_1um_scaffold_1038_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11523..12218)
DNA (696bp) protein (232aa)
exonuclease n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707F9C
exonuclease
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
FFSP_072018_bottom_0_1um_scaffold_1038_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12215..14104)
DNA (1890bp) protein (630aa)
prohead protease n=1 Tax=Thiobacillus denitrificans RepID=UPI000360935E
CBS signal-transduction protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1038_18
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14256..14960
DNA (705bp) protein (235aa)
MFS transporter n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025575CE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF24042.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
FFSP_072018_bottom_0_1um_scaffold_1038_19
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15051..16448)
DNA (1398bp) protein (466aa)
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F19BA
opmR; outer membrane protein oprM precursor
Outer membrane protein oprM {ECO:0000313|EMBL:CAI07213.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
FFSP_072018_bottom_0_1um_scaffold_1038_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16448..19609)
DNA (3162bp) protein (1054aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ00_THIDA
hydrophobe/amphiphile efflux-1 HAE1
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:AAZ97370.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1038_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19621..20817)
DNA (1197bp) protein (399aa)
Secretion protein HlyD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIZ9_THIDA
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97371.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1038_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21019..21249
DNA (231bp) protein (77aa)
Possible Transcriptional Regulator, TetR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIZ8_THIDA
TetR family transcriptional regulator
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97372.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 23 items

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