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FFSP_072018_bottom_0_1um_scaffold_492_11

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(10881..11603)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12495352 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 240.0
  • Bit_score: 424
  • Evalue 5.00e-116
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 419
  • Evalue 4.60e-115
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 419
  • Evalue 2.30e-114

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGCTGTTAAACCCACGCAGCAAGCGACGTCGCAAGACGAACAGATCTCCAAATATGCGCCGCTGGTCAAGCGCATTGCCTATCACATGATGGCGCGGCTACCTGCCAGCGTCGAGGCCGACGACCTCATCCAGGTGGGCCTGATCGGCCTGATGGATGCGGTATCCCGCTTCGACGGCAATCAGGGCGCCCAGTTCGAATCCTATGCCACCCAGCGTATCCGCGGCTCCATGCTCGACGAGCTGCGCGAAGCCGACTGGTTGCCGCGTCATGTGCGGCAGAAATCGCGGCAGATCGAATCCGCCATCAACCGGCTGCAACAGCGCAACGGCAAGCCGCCGACCGAGCAGGAAATCTCGGCCGAGCTGGACATGCCGATCGACCAGTACCAGTCCATGCTGGGCGACGTCAGATGCTCGCAGTTGCTGTATTACGAAGACTTCTCGGACGAGGACAGCGCCAGCTTTCTGGAACGCTACCTGGTCGACGGCAGCAACGATCCGCTTGCGGTGCTGGAGGACGGCGGCTTCCGCGACAGTCTGGTTGCCGCGATCCACAGCCTGCCCGAACGCGAGCGCAGCATGATGGGCATGTACTACGAGCAGGACATGAACCTGAAGGAAATCGGCGCGGTGCTCGGCGTGTCCGAATCGCGCGTCTGCCAGCTGCATTCGCAGGCGGTGGCGCGCCTGCGTGCCCAGTTGAAGATCTGGAAAAGCTGA
PROTEIN sequence
Length: 241
MAVKPTQQATSQDEQISKYAPLVKRIAYHMMARLPASVEADDLIQVGLIGLMDAVSRFDGNQGAQFESYATQRIRGSMLDELREADWLPRHVRQKSRQIESAINRLQQRNGKPPTEQEISAELDMPIDQYQSMLGDVRCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDGGFRDSLVAAIHSLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKS*