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FFSP_072018_bottom_0_1um_scaffold_704

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_704_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1023)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein id=1362225 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1748..2176
DNA (429bp) protein (143aa)
prepilin-type N-terminal cleavage/methylation domain-containing protein id=12495143 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_704_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2269..4239)
DNA (1971bp) protein (657aa)
potassium transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00036212F3
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:AAZ96492.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
antiporter-2, CPA2 family monovalent cation/proton antiporter
FFSP_072018_bottom_0_1um_scaffold_704_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4287..5273
DNA (987bp) protein (329aa)
KpsF/GutQ family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366AAD3
capsule expression protein KpsF/GutQ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_704_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5273..5815
DNA (543bp) protein (181aa)
Phosphatase kdsC id=1353387 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
phosphatase kdsC
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..6384
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003653CF0
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6381..6926
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003683388
OstA-like family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_704_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6923..7645
DNA (723bp) protein (241aa)
ATPase component ABC-type transport system id=1353385 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7714..9144
DNA (1431bp) protein (477aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor id=1353384 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9294..9635
DNA (342bp) protein (114aa)
Possible Sigma 54 modulation protein/ribosomal protein S30EA id=1353383 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
30S ribosomal protein S30
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_704_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9723..10178
DNA (456bp) protein (152aa)
Possible PTS IIA-like nitrogen-regulatory protein PtsN id=1353382 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PTS IIA-like nitrogen-regulatory protein PtsN
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10192..11148
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase/phosphorylase id=1353381 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11148..11984
DNA (837bp) protein (279aa)
UPF0042 nucleotide-binding protein Tbd_0529 id=1353380 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11984..12343
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A1646
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12324..12884
DNA (561bp) protein (187aa)
hypothetical protein; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] id=12495130 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_704_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12860..13477
DNA (618bp) protein (206aa)
Phenylacrylic acid decarboxylase id=1320888 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
aromatic acid decarboxylase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13474..14070
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E8B71
peptidase S16
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_704_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14275..14826
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=1320890 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14823..15029
DNA (207bp) protein (69aa)
hypothetical protein id=12497763 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_704_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15033..15233
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=1320892 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15265..15825
DNA (561bp) protein (187aa)
transcription elongation factor GreB n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D7C03
greB; transcription elongation factor GreB
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15908..16306
DNA (399bp) protein (133aa)
Cytochrome c class I id=1320894 bin=GWE1_T_denit_62_9 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c, class I
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16357..17199)
DNA (843bp) protein (281aa)
Thioredoxin id=1320895 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17224..18546)
DNA (1323bp) protein (441aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase id=1320896 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18599..19192)
DNA (594bp) protein (198aa)
recR; recombination protein RecR; K06187 recombination protein RecR id=12495112 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
recR; recombination protein RecR
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19197..19523)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D16AC
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_704_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19520..20002)
DNA (483bp) protein (161aa)
DNA polymerase subunits gamma and tau (EC:2.7.7.7)
DNA polymerase subunits gamma and tau id=1320899 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 27 items

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