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FFSP_072018_mid_0_1um_scaffold_1141

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_mid_0_1um_scaffold_1141_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


3..191
DNA (189bp) protein (63aa)
30S ribosomal protein S1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMD3_NIAKG
RNA binding S1 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

335..1141
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35
outer membrane assembly lipoprotein YfiO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1134..1403
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1490..2416
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F8AC1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2413..2772
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808869
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2772..3464
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD
3-oxoacid CoA-transferase subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3496..4152
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
3-oxoacid CoA-transferase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4231..4701
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4810..5169
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EB9CC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5181..6356)
DNA (1176bp) protein (392aa)
SAM-dependent methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00036170B8
PUA domain containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6450..7019
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
protein grpE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7035..8204
DNA (1170bp) protein (390aa)
molecular chaperone DnaJ n=1 Tax=Segetibacter koreensis RepID=UPI00037F3AAD
chaperone protein dnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1141_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8222..9748
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000364DAF8
signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 13 items

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