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FFSP_072018_mid_0_1um_scaffold_1989

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_mid_0_1um_scaffold_1989_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..596
DNA (594bp) protein (198aa)
DNA replication and repair protein RecF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE8_NIAKG
DNA replication and repair protein RecF
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

618..776
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037551BA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(807..1220)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037877F0
histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1276..2361)
DNA (1086bp) protein (362aa)
DoxX family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG4_NIAKG
DoxX family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2373..2918)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMK7_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2965..3789
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373BC89
dihydropteroate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3835..4755)
DNA (921bp) protein (307aa)
peptidylprolyl isomerase (EC:5.2.1.8)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F1EC6
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4757..5701)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370D2E0
phosphoesterase RecJ domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5831..6247
DNA (417bp) protein (139aa)
nucleoside diphosphate kinase n=1 Tax=Segetibacter koreensis RepID=UPI000380D0C8
nucleoside diphosphate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6422..9679
DNA (3258bp) protein (1086aa)
Peptidase S41 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EN12_RUNSL
peptidase S41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_trna_1
unknown

Not on your lists

comp(9779..9852)
DNA (74bp)
transferRNA Pro
FFSP_072018_mid_0_1um_scaffold_1989_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10006..11268
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003622526
dihydroorotase, multifunctional complex type
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11275..11811
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ1_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11818..12768
DNA (951bp) protein (317aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ2_NIAKG
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12778..13920
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B2D97
glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13931..14545
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003749ADD
phosphoheptose isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14591..15154
DNA (564bp) protein (188aa)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ7_NIAKG
histidinol-phosphate phosphatase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_1989_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15206..15535
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370765B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 18 items

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