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FFSP_09252017_12_scaffold_1421

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_1421_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

FFSP_09252017_12_scaffold_1421_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

176..2770
DNA (2595bp) protein (865aa)
ATP-dependent chaperone ClpB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE0_NIAKG
ATP-dependent chaperone ClpB
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2824..3489
DNA (666bp) protein (222aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3699..4571
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPC8_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4640..5698
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035F07C0
saccharopine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5747..6970
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E168
major facilitator superfamily (MFS) permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7028..8056)
DNA (1029bp) protein (343aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8092..9642)
DNA (1551bp) protein (517aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9642..10178)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003807D40
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10316..11425)
DNA (1110bp) protein (370aa)
Carboxylate-amine ligase Niako_0394 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQQ8_NIAKG
Carboxylate-amine ligase ybdK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11449..12402)
DNA (954bp) protein (318aa)
glutathione synthase n=1 Tax=Niabella aurantiaca RepID=UPI00037E5F48
glutathione synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12497..13336
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5299
esterase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13389..16643)
DNA (3255bp) protein (1085aa)
OmpA-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRW7_9SPHI
cell envelope biogenesis protein OmpA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16767..19934)
DNA (3168bp) protein (1056aa)
Outer membrane receptor for ferrienterochelin and colicins id=4357469 bin=GWF2_Bacteroidetes_49_14 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
outer membrane receptor for ferrienterochelin and colicins
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19976..21265
DNA (1290bp) protein (430aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037E28C7
GTP cyclohydrolase-2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21268..22083)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRJ7_SPILD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22181..23170)
DNA (990bp) protein (330aa)
phosphate starvation protein PhoH n=1 Tax=Segetibacter koreensis RepID=UPI00037A0AD1
PhoH family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23319..23966)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003781596
ribulose-phosphate 3-epimerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24103..25203
DNA (1101bp) protein (367aa)
WD40-like Beta Propeller Repeat family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EEF1_9FLAO
tolB; putative TolB protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25329..25802
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPD4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25863..27020
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUU7_CHIPD
homogentisate 12-dioxygenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27060..27224
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DD0C4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27634..27852
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU93_CHIPD
translation initiation factor IF-1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


27920..28396
DNA (477bp) protein (159aa)
30S ribosomal protein S13 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU95_CHIPD
30S ribosomal protein S13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


28549..28959
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Niabella aurantiaca RepID=UPI00036DE442
30S ribosomal protein S11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


29103..29708
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Niabella soli DSM 19437 RepID=H1NUG5_9SPHI
30S ribosomal protein S4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29747..30748
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI98_NIAKG
DNA-directed RNA polymerase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


30829..31341
DNA (513bp) protein (171aa)
50S ribosomal protein L17 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI97_NIAKG
50S ribosomal protein L17P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31436..32539
DNA (1104bp) protein (368aa)
Carbamoyl-phosphate synthase small chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI96_NIAKG
carbamoyl-phosphate synthase small subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1421_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32549..32977
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase n=1 Tax=Niabella aurantiaca RepID=UPI00036CBF58
3-dehydroquinate dehydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 35 in total

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