ggKbase home page

FFSP_09252017_12_scaffold_3913

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_3913_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

58..1146
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362C17C
adenine glycosylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1218..1607
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT5_NIAKG
single-strand binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1648..2997
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365DF92
gliding motility-associated protein GldE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2990..3589
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003744D1C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3626..4219
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4212..5588
DNA (1377bp) protein (459aa)
iron-sulfur cluster binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037061D2
iron-sulfur cluster binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5585..5950
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00038267FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5929..6816
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00038267FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6850..7776)
DNA (927bp) protein (309aa)
DMT(Drug/metabolite transporter) superfamily permease id=4402472 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
putative drug/metabolite-transporting permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7782..9275)
DNA (1494bp) protein (498aa)
IMP cyclohydrolase n=1 Tax=Segetibacter koreensis RepID=UPI000378115B
phosphoribosylaminoimidazolecarboxamide formyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9318..11348)
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037835FD
ComEC/Rec2-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11413..12447)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371ACD9
carB; carbamoyl phosphate synthase large subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12552..13346)
DNA (795bp) protein (265aa)
CHRD domain containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J766_CYCMS
CHRD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13464..14006
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM00_SOLCM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14045..15325)
DNA (1281bp) protein (427aa)
DNA-directed DNA polymerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG
DNA-directed DNA polymerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15358..15792)
DNA (435bp) protein (145aa)
SOS response UmuD protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG
SOS response UmuD protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15864..16346
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644DC1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16402..17841
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624EB1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17850..18569
DNA (720bp) protein (240aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG
nucleotidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_3913_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18569..19084
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369E272
oxidoreductase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 20 items

View Taxonomy