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FFSP_09252017_12_scaffold_6666

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_6666_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(108..749)
DNA (642bp) protein (214aa)
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7Y472_9BACT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_2
unknown

Not on your lists

comp(807..2189)
DNA (1383bp) protein (461aa)

This feature has no annotations

FFSP_09252017_12_scaffold_6666_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2196..2999)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Zea mays RepID=K7TQT9_MAIZE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
FFSP_09252017_12_scaffold_6666_4
unknown

Not on your lists

comp(3202..3381)
DNA (180bp) protein (60aa)

This feature has no annotations

FFSP_09252017_12_scaffold_6666_5
unknown

Not on your lists

3426..3956
DNA (531bp) protein (177aa)

This feature has no annotations

FFSP_09252017_12_scaffold_6666_trna_2
unknown

Not on your lists

comp(4114..4187)
DNA (74bp)
transferRNA Met
FFSP_09252017_12_scaffold_6666_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4257..4844)
DNA (588bp) protein (196aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4882..5100)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD30_9SPHI
membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5107..5421)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD10_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5427..8018)
DNA (2592bp) protein (864aa)
Acriflavin resistance protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPA8_9SPHI
acriflavin resistance protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8005..8559)
DNA (555bp) protein (185aa)
Acriflavin resistance protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD31_9SPHI
acriflavin resistance protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8583..9686)
DNA (1104bp) protein (368aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNU1_9SPHI
RND family efflux transporter MFP subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9705..11012)
DNA (1308bp) protein (436aa)
Outer membrane efflux family protein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNG0_9SPHI
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11298..12104
DNA (807bp) protein (269aa)
6-phosphogluconolactonase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GLN3_9SPHI
6-phosphogluconolactonase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12101..13387)
DNA (1287bp) protein (429aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCT4_CHIPD
DEAD/DEAH box helicase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13412..14203)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003667431
Hpt sensor hybrid histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14274..14981
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003658536
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14991..16178
DNA (1188bp) protein (396aa)
GTPase HflX n=1 Tax=Segetibacter koreensis RepID=UPI000361071D
GTP-binding protein HflX
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16179..16532
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F98DB
Rieske (2Fe-2S) domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_6666_trna_1
unknown

Not on your lists

16591..16673
DNA (83bp)
transferRNA Asn
FFSP_09252017_12_scaffold_6666_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16630..18054)
DNA (1425bp) protein (475aa)
Resolvase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFF7_CHIPD
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:ACU61662.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
FFSP_09252017_12_scaffold_6666_20
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18517..18819
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8XZR9_9BACE
Mobile element protein {ECO:0000313|EMBL:GAE86656.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
transposase
Displaying 22 items

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