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RTP_03222018_0_2um_scaffold_18285

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_18285_1

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3..902
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QUH9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10902.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
3-deoxy-D-manno-octulosonic-acid transferase
RTP_03222018_0_2um_scaffold_18285_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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906..1244
DNA (339bp) protein (113aa)
hypothetical protein id=12496949 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96754.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_18285_3
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1276..1812
DNA (537bp) protein (179aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8K7_METSD
N-acetyl-anhydromuranmyl-L-alanine amidase
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ACT49477.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
RTP_03222018_0_2um_scaffold_18285_4

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comp(1951..3516)
DNA (1566bp) protein (522aa)
DNA repair protein RecN (Recombination protein N) n=1 Tax=mine drainage metagenome RepID=E6QUI2_9ZZZZ
DNA repair protein RecN (Recombination protein N) {ECO:0000313|EMBL:CBI10905.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA repair protein RecN
RTP_03222018_0_2um_scaffold_18285_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3516..4388)
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V1_9PROT
RTP_03222018_0_2um_scaffold_18285_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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4452..5471
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJP5_9PROT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Displaying 6 items

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