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RTP_03222018_0_2um_scaffold_9842

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_9842_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..348
DNA (348bp) protein (116aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) (MAT) n=1 Tax=mine drainage metagenome RepID=E6QSD0_9ZZZZ
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_9842_2
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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382..1800
DNA (1419bp) protein (473aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Thauera sp. 27 RepID=N6X8B2_9RHOO
RTP_03222018_0_2um_scaffold_9842_3

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1820..2650
DNA (831bp) protein (277aa)
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:CBI10264.1}; EC=1.5.1.20 {ECO:0000313|EMBL:CBI10264.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=mine drainage metagenome RepID=E6QSP2_9ZZZZ
RTP_03222018_0_2um_scaffold_9842_4
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2671..3597)
DNA (927bp) protein (309aa)
Ribosome biogenesis GTPase A n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HUA2_9BURK
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
GTP-binding protein HSR1-like
RTP_03222018_0_2um_scaffold_9842_trna_1
unknown

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comp(3735..3807)
DNA (73bp)
transferRNA Phe
RTP_03222018_0_2um_scaffold_9842_5
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3857..4549)
DNA (693bp) protein (231aa)
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QMP2_METS6
mrcB; monofunctional biosynthetic peptidoglycan transglycosylase
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_9842_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4546..5346)
DNA (801bp) protein (267aa)
Shikimate dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE76_9PROT
shikimate 5-dehydrogenase
Tax=CG_Beta_01
Displaying 7 items

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