ggKbase home page

RTP_03222018_0_2um_scaffold_1709

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_1709_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..505)
DNA (504bp) protein (168aa)
Glucose-1-phosphate thymidylyltransferase id=1332270 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glucose-1-phosphate thymidylyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_1709_2

Not on your lists

comp(502..1566)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6 dehydratase {ECO:0000313|EMBL:CBI11172.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CBI11172.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6 dehydratase n=1 Tax=mine drainage metagenome RepID=E6QV99_9ZZZZ
RTP_03222018_0_2um_scaffold_1709_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1814..2911)
DNA (1098bp) protein (366aa)
Glycosyltransferase, RfaG n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHZ9_THIDA
glycosyltransferase, RfaG
Glycosyltransferase, RfaG {ECO:0000313|EMBL:AAZ97734.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_1709_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2946..4067)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Serratia fonticola AU-AP2C RepID=U2MDT9_SERFO
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_1709_5
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(4551..5039)
DNA (489bp) protein (163aa)
Putative acyltransferase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHU6_BRESC
acyltransferase
Tax=BJP_IG2069_Spirochaetales_48_31
RTP_03222018_0_2um_scaffold_1709_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5061..6236)
DNA (1176bp) protein (392aa)
Glycosyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3IQT1_9PLAN
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_1709_7
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..7465)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PN34_9ZZZZ
putative glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
RTP_03222018_0_2um_scaffold_1709_8
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(7462..8472)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TEX8_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25587.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
glycosyl transferase family 2
RTP_03222018_0_2um_scaffold_1709_9
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8469..9941)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNQ2_ACCPU
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
RTP_03222018_0_2um_scaffold_1709_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9941..11209)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003658B76
polysaccharide pyruvyl transferase
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_03222018_0_2um_scaffold_1709_11
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11212..12243)
DNA (1032bp) protein (344aa)
Nitroreductase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZQ1_METFK
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABE50286.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
RTP_03222018_0_2um_scaffold_1709_12
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12247..13500)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035C4F83
polysaccharide biosynthesis protein
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_03222018_0_2um_scaffold_1709_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13534..14235)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CC46A
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_1709_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14232..14810)
DNA (579bp) protein (193aa)
Membrane protein, putative n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHY8_THIDA
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ97745.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 14 items

View Taxonomy