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RTP_03222018_0_2um_scaffold_1887

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_1887_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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48..701
DNA (654bp) protein (218aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADT8_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:BAN36718.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_2um_scaffold_1887_2
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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701..1024
DNA (324bp) protein (108aa)
Rhodanese-related sulfurtransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GL63_THISH
thiF; Sulfur carrier protein adenylyltransferase ThiF
Sulfurtransferase {ECO:0000313|EMBL:KIF81782.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
RTP_03222018_0_2um_scaffold_1887_3
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1234..2481)
DNA (1248bp) protein (416aa)
Kdo transferase n=1 Tax=mine drainage metagenome RepID=E6QSG9_9ZZZZ
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Tax=GWA2_Gallionellales_54_124_curated
RTP_03222018_0_2um_scaffold_1887_4

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comp(2481..3626)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QSH0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10192.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1887_5

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3673..4413
DNA (741bp) protein (247aa)
pteridine reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000378B8F2
Short-chain dehydrogenase/reductase (SDR) superfamily {ECO:0000313|EMBL:CBI10193.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pteridine reductase
RTP_03222018_0_2um_scaffold_1887_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4556..7399)
DNA (2844bp) protein (948aa)
diguanylate cyclase/phosphodiesterase id=12495900 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_1887_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..8271)
DNA (873bp) protein (291aa)
ABC-type phosphate/phosphonate transport system periplasmic component-like protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL14_ACCPU
phosphate/phosphonate ABC transporter membrane protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_1887_8
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8597..9748)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KA33_THASP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR01259.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
RTP_03222018_0_2um_scaffold_1887_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9804..12509)
DNA (2706bp) protein (902aa)
Protein translocase subunit SecA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ36_9PROT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
secA; preprotein translocase subunit SecA
RTP_03222018_0_2um_scaffold_1887_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12600..13049
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4G3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:GAO37096.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1887_11
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13046..13234)
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=2029278 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
RTP_03222018_0_2um_scaffold_1887_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13234..13956)
DNA (723bp) protein (241aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=1324225 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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