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RTP_03222018_0_2um_scaffold_2881

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_2881_1

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comp(43..1704)
DNA (1662bp) protein (554aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein n=1 Tax=mine drainage metagenome RepID=E6QS13_9ZZZZ
Putative ubiquinone biosynthesis protein {ECO:0000313|EMBL:CBI10035.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_03222018_0_2um_scaffold_2881_2

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1815..2348
DNA (534bp) protein (178aa)
NLP/P60 n=1 Tax=mine drainage metagenome RepID=E6QS12_9ZZZZ
NLP/P60 {ECO:0000313|EMBL:CBI10034.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
spr; nlp/p60 protein
RTP_03222018_0_2um_scaffold_2881_3
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2358..4049
DNA (1692bp) protein (564aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003727311
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_2881_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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4082..4747
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35580.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_2um_scaffold_2881_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4817..5011)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTX9_9ZZZZ
hypothetical protein
Tax=CG_Hydro_01
RTP_03222018_0_2um_scaffold_2881_6

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comp(5013..5351)
DNA (339bp) protein (113aa)
(2Fe-2S) ferredoxin n=1 Tax=mine drainage metagenome RepID=E6QTX8_9ZZZZ
(2Fe-2S) ferredoxin {ECO:0000313|EMBL:CBI10700.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
(2Fe-2S)-binding protein
RTP_03222018_0_2um_scaffold_2881_7

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comp(5364..7226)
DNA (1863bp) protein (621aa)
Chaperone protein HscA homolog n=1 Tax=mine drainage metagenome RepID=E6QTX7_9ZZZZ
Chaperone protein HscA homolog {ECO:0000313|EMBL:CBI10699.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hscA; chaperone protein HscA
RTP_03222018_0_2um_scaffold_2881_8

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comp(7229..7762)
DNA (534bp) protein (178aa)
Co-chaperone protein hscB (Hsc20) n=1 Tax=mine drainage metagenome RepID=E6QTX6_9ZZZZ
Co-chaperone protein hscB (Hsc20) {ECO:0000313|EMBL:CBI10698.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
co-chaperone Hsc20
RTP_03222018_0_2um_scaffold_2881_9

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comp(7779..8102)
DNA (324bp) protein (108aa)
Iron-binding protein iscA (Iron-sulfur cluster assembly protein) n=1 Tax=mine drainage metagenome RepID=E6QTX5_9ZZZZ
iron-sulfur cluster assembly protein IscA
Iron-binding protein iscA (Iron-sulfur cluster assembly protein) {ECO:0000313|EMBL:CBI10697.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_03222018_0_2um_scaffold_2881_10
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8112..8507)
DNA (396bp) protein (132aa)
FeS cluster assembly scaffold IscU n=1 Tax=Rhodocyclaceae RepID=UPI0003793829
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:EGK73385.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
nifU; nifU-like protein
RTP_03222018_0_2um_scaffold_2881_11
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8527..9738)
DNA (1212bp) protein (404aa)
cysteine desulfurase n=1 Tax=Leeia oryzae RepID=UPI00035FBCD7
iscS; cysteine desulfurase
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_2881_12
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9757..10236)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZ27_CHRVO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
RTP_03222018_0_2um_scaffold_2881_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10290..11042)
DNA (753bp) protein (251aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:AAZ97115.1}; EC=2.3.1.30 {ECO:0000313|EMBL:AAZ97115.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Serine acetyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJN7_THIDA
RTP_03222018_0_2um_scaffold_2881_14
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11096..11836)
DNA (741bp) protein (247aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
RNA methyltransferase TrmH, group 1 n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H357_METFK
RNA methyltransferase TrmH, group 1
RTP_03222018_0_2um_scaffold_2881_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11925..12725
DNA (801bp) protein (267aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKE4_9PROT
Tax=CG_Hydro_01
RTP_03222018_0_2um_scaffold_2881_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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12798..14024
DNA (1227bp) protein (409aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Aspartokinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Y1_9PROT
aspartate kinase
RTP_03222018_0_2um_scaffold_2881_trna_1
unknown

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14091..14180
DNA (90bp)
transferRNA Ser
RTP_03222018_0_2um_scaffold_2881_trna_2
unknown

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14260..14333
DNA (74bp)
transferRNA Arg
Displaying 18 items

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