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RTP_03222018_0_2um_scaffold_5367

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_5367_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1I0_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34552.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_2um_scaffold_5367_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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694..1104
DNA (411bp) protein (137aa)
MerR family transcriptional regulator id=1311326 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
merR regulatory family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_5367_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1139..1396
DNA (258bp) protein (86aa)
Thioredoxin/glutaredoxin id=1311325 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin/glutaredoxin
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_5367_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1422..2036
DNA (615bp) protein (205aa)
Cytochrome c biogenesis protein, transmembrane region id=1311324 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_5367_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2038..2733
DNA (696bp) protein (232aa)
Putative cytochrome c biogenesis protein id=1311323 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome C biogenesis transmembrane region family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_5367_6
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3084..3830
DNA (747bp) protein (249aa)
glutaredoxin-family domain-containing protein (EC:1.11.1.15)
Glutaredoxin-family domain protein n=3 Tax=Acidithiobacillus RepID=B5EMB2_ACIF5
AhpC/TSA family/glutaredoxin domain protein {ECO:0000313|EMBL:EGQ62863.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
RTP_03222018_0_2um_scaffold_5367_7

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4013..5359
DNA (1347bp) protein (449aa)
Glutathione oxidoreductase Gor {ECO:0000313|EMBL:CBI10218.1}; EC=1.8.1.7 {ECO:0000313|EMBL:CBI10218.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glutathione oxidoreductase Gor n=1 Tax=mine drainage metagenome RepID=E6QSJ6_9ZZZZ
glutathione-disulfide reductase
RTP_03222018_0_2um_scaffold_5367_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5462..5932
DNA (471bp) protein (157aa)
Ferritin Dps family protein n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QSQ6_CYAP0
ferritin Dps family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RTP_03222018_0_2um_scaffold_5367_9

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comp(6013..6807)
DNA (795bp) protein (265aa)
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=mine drainage metagenome RepID=E6PRY0_9ZZZZ
Putative transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:CBH97686.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transmembrane transcriptional regulator
RTP_03222018_0_2um_scaffold_5367_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6804..7328)
DNA (525bp) protein (175aa)
id=12494694 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
sigma-24 (FecI)
Sigma-24 (FecI) {ECO:0000313|EMBL:AAZ97607.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 10 items

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