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RTP_03222018_0_2um_scaffold_5907

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_5907_1
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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205..1209
DNA (1005bp) protein (335aa)
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDS52828.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
NlpA lipoprotein id=1279047 bin=GWE1_Burkholderiales_65_30 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
NlpA lipoprotein
RTP_03222018_0_2um_scaffold_5907_2

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1264..2283
DNA (1020bp) protein (340aa)
Putative fatty acid desaturase n=1 Tax=mine drainage metagenome RepID=E6PK38_9ZZZZ
Putative fatty acid desaturase {ECO:0000313|EMBL:CBH95289.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative fatty acid desaturase
RTP_03222018_0_2um_scaffold_5907_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2285..2644
DNA (360bp) protein (120aa)
putative 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CAZ90233.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CAZ90233.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CNV5_THIA3
RTP_03222018_0_2um_scaffold_5907_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2641..3390
DNA (750bp) protein (250aa)
putative 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=1279050 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
RTP_03222018_0_2um_scaffold_5907_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3387..4289
DNA (903bp) protein (301aa)
hypothetical protein id=5081525 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative Permease of the drug/metabolite transporter (DMT) superfamily
Tax=GWE1_Burkholderiales_65_30_curated
RTP_03222018_0_2um_scaffold_5907_6
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4286..5056
DNA (771bp) protein (257aa)
Creatinine amidohydrolase {ECO:0000313|EMBL:CDS52833.1}; EC=3.5.2.10 {ECO:0000313|EMBL:CDS52833.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
crna3; Creatinine amidohydrolase (EC:3.5.2.10)
Creatinine amidohydrolase n=1 Tax=mine drainage metagenome RepID=E6PK36_9ZZZZ
RTP_03222018_0_2um_scaffold_5907_7

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5053..5742
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HP14_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KKN70923.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cysteine hydrolase
RTP_03222018_0_2um_scaffold_5907_8

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5739..6521
DNA (783bp) protein (261aa)
Putative AHL-lactonase n=1 Tax=mine drainage metagenome RepID=E6PK34_9ZZZZ
Putative AHL-lactonase {ECO:0000313|EMBL:CBH95285.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative AHL-lactonase
RTP_03222018_0_2um_scaffold_5907_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6531..7103
DNA (573bp) protein (191aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein id=1355379 bin=GWE1_T_denit_62_9 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 9 items

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