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RTP_03222018_0_2um_scaffold_4975

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_4975_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
Type IV pilus assembly protein, PilB n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B749_9PROT
Type II secretory protein GspE {ECO:0000313|EMBL:GAO37084.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
type IV pilus assembly protein, PilB
RTP_03222018_0_2um_scaffold_4975_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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468..1694
DNA (1227bp) protein (409aa)
Type II secretion system protein n=2 Tax=Methylovorus RepID=C6X9L4_METSD
Type II secretion system protein F {ECO:0000313|EMBL:GAO37085.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
type II secretion system protein
RTP_03222018_0_2um_scaffold_4975_3
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1697..2554
DNA (858bp) protein (286aa)
Prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP04_SIDLE
Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
RTP_03222018_0_2um_scaffold_4975_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2551..3159
DNA (609bp) protein (203aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=mine drainage metagenome RepID=E6QRF4_9ZZZZ
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_4975_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3224..3976
DNA (753bp) protein (251aa)
Cell division protein ZapD n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJN4_AZOSU
hypothetical protein
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
RTP_03222018_0_2um_scaffold_4975_6
Pseudomonas sp. GM33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3973..4161
DNA (189bp) protein (63aa)
DNA gyrase inhibitor YacG n=4 Tax=Pseudomonas RepID=K9NP47_9PSED
zinc-binding protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM33.;"
RTP_03222018_0_2um_scaffold_4975_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4171..4833)
DNA (663bp) protein (221aa)
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ribose-5-phosphate isomerase A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9J9_9PROT
RTP_03222018_0_2um_scaffold_4975_8

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4951..6468
DNA (1518bp) protein (506aa)
Threonine dehydratase biosynthetic (Threonine deaminase) {ECO:0000313|EMBL:CBI09821.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBI09821.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase biosynthetic (Threonine deaminase) n=1 Tax=mine drainage metagenome RepID=E6QRE9_9ZZZZ
RTP_03222018_0_2um_scaffold_4975_9

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6468..7805
DNA (1338bp) protein (446aa)
Lytic transglycosylase, catalytic n=1 Tax=mine drainage metagenome RepID=E6QRE8_9ZZZZ
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CBI09820.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
lytic transglycosylase catalytic subunit
Displaying 9 items

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