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RTP_03222018_0_2um_scaffold_560

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_560_31
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32243..32659)
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SD13_GALCS
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADL54702.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_03222018_0_2um_scaffold_560_32
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32671..33276)
DNA (606bp) protein (202aa)
Probable exbB-like biopolymer transport n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIR2_THIDA
exbB-like biopolymer transport
Probable exbB-like biopolymer transport {ECO:0000313|EMBL:AAZ97463.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_560_33
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33352..35139)
DNA (1788bp) protein (596aa)
Ferrous iron transport protein B n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BRX9_9GAMM
ferrous iron transport protein B
Tax=CG_Hydro_01
RTP_03222018_0_2um_scaffold_560_34
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35136..35372)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00036A6734
FeoA family protein
Tax=GWA2_Gallionellales_60_18_curated
RTP_03222018_0_2um_scaffold_560_35
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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35559..36581
DNA (1023bp) protein (341aa)
glucokinase (EC:2.7.1.2)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368649C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_560_36

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36698..37993
DNA (1296bp) protein (432aa)
Glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) {ECO:0000313|EMBL:CBI10952.1}; EC=2.7.7.27 {ECO:0000313|EMBL:CBI10952.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) n=1 Tax=mine drainage metagenome RepID=E6QUM9_9ZZZZ
RTP_03222018_0_2um_scaffold_560_37
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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38011..39732
DNA (1722bp) protein (574aa)
Glycosyl hydrolase family 57 id=1332708 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyl hydrolase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_560_38

Not on your lists

39729..41087
DNA (1359bp) protein (453aa)
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) {ECO:0000313|EMBL:CBI10950.1}; EC=2.4.1.25 {ECO:0000313|EMBL:CBI10950.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) n=1 Tax=mine drainage metagenome RepID=E6QUM7_9ZZZZ
RTP_03222018_0_2um_scaffold_560_39
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41087..43255
DNA (2169bp) protein (723aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUK1_9GAMM
RTP_03222018_0_2um_scaffold_560_40

Not on your lists

43257..44732
DNA (1476bp) protein (492aa)
Glycogen synthase {ECO:0000313|EMBL:CBI10948.1}; EC=2.4.1.21 {ECO:0000313|EMBL:CBI10948.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glycogen synthase n=1 Tax=mine drainage metagenome RepID=E6QUM5_9ZZZZ
glycogen/starch synthase, ADP-glucose type
RTP_03222018_0_2um_scaffold_560_41
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44729..47221
DNA (2493bp) protein (831aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUJ9_9GAMM
RTP_03222018_0_2um_scaffold_560_42
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47322..47669)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF2A1
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_560_43
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47656..48105)
DNA (450bp) protein (150aa)
Dihydroneopterin triphosphate pyrophosphatase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBG0_NITMU
ntpA; dATP pyrophosphohydrolase
Dihydroneopterin triphosphate pyrophosphatase {ECO:0000313|EMBL:ABB73911.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
RTP_03222018_0_2um_scaffold_560_44

Not on your lists

comp(48199..48651)
DNA (453bp) protein (151aa)
Phosphohistidine phosphatase, SixA n=1 Tax=mine drainage metagenome RepID=E6QTK4_9ZZZZ
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:CBI10576.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphohistidine phosphatase SixA
RTP_03222018_0_2um_scaffold_560_45
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48696..49316)
DNA (621bp) protein (207aa)
CHAD domain-containing protein n=1 Tax=Marinobacterium stanieri RepID=UPI000255993E
adenylate cyclase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_560_46
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49373..51433
DNA (2061bp) protein (687aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] id=12497277 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
polyphosphate kinase (EC:2.7.4.1)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_560_47
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51471..52064)
DNA (594bp) protein (198aa)
Maf-like protein SCD_n01541 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC85_9PROT
Maf-like protein SCT_2662 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
maf protein, putative
RTP_03222018_0_2um_scaffold_560_48

Not on your lists

comp(52071..53918)
DNA (1848bp) protein (616aa)
Oxaloacetate decarboxylase alpha chain {ECO:0000313|EMBL:CBI09550.1}; EC=4.1.1.3 {ECO:0000313|EMBL:CBI09550.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pyruvate carboxylase subunit B (EC:4.1.1.3)
Oxaloacetate decarboxylase alpha chain n=1 Tax=mine drainage metagenome RepID=E6QQM9_9ZZZZ
Displaying items 31-48 of 48 in total

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