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RTP_03222018_0_2um_scaffold_560_21

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 23386..24462

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FXZ5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 358.0
  • Bit_score: 568
  • Evalue 4.20e-159
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 358.0
  • Bit_score: 568
  • Evalue 5.90e-159
prfA; peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 358.0
  • Bit_score: 566
  • Evalue 4.50e-159

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAAACCTACCTTACTGAATAAACTCGCTCAATTAACTGAGCGTTTAGACGAAATTGATCGTTTGCTGTCCGTAGAAACAGTGACCAACAACATGGATAACTACCGAAAACTAACTCGCGAACACGCGGAAATTGGTCCTGTTGTCGCTTTATATCGCGCTTATGTGCAAACAGAAACGGATATTGCCAGTGCACATGAAATGCTGGCAGATATAGAAATGAAAGAGCTGGCAGAGCAAGAAATTGACGATGGCAAAGTGCGCTTGCAGGAACTGGAACTCTCGTTGCAGACGGAATTGTTGCCAAAAGATCCTAATGATGAACGTAATATTTTTCTGGAAATTCGTGCAGGTACGGGAGGCGATGAGTCAGCATTGTTTTCGGCTGACTTGTTTCGAATGTATACACGCTTTGCTGAACGCCAGCGCTGGAAAGTGGAGATTATTTCTGAAAGCATGAGCGAGCTCGGCGGCTATAAAGAAGTGATATTGAAAATTGTCGGGCGTGGTGCCTATTCGCGCTTGAAATTTGAGTCAGGTGGTCATCGCGTGCAGCGTGTTCCTGCCACAGAGACGCAAGGGCGGATACATACTTCAGCATGTACTGTTGCGGTGATGCCAGAGGCAGACGAAGTGGCAGATGTAAATCTTAATCCCGCCGATTTGCGTATAGATACCTACCGCGCCAGTGGTGCAGGTGGGCAGCACATTAACAAAACCGATTCAGCTGTGCGCATTACACATCTACCTACAGGGATTGTAGTCGAGTGCCAAGATGATAGGTCACAACATAAAAATAAAGCACAGGCTTTATCTGTACTCGCGGCACGAATCAAAGACAAGCAATTGCGTGAAATTGCTTCTAAAGAAGCCGCAACGCGTAAATCATTGATAGGCAGTGGCGATAGGTCGGAGCGTATTCGTACTTATAATTTTCCACAAGGACGGATTACTGATCACCGTATTAATCTGACGTTATACAAAATCGATGCGATTATGGACGGTGATTTAGACGAATTGCTATCAGGGCTGGCGACTGAGCATCAGGCTGAGTTGTTAGCTGCAATGGGTGAATAA
PROTEIN sequence
Length: 359
MKPTLLNKLAQLTERLDEIDRLLSVETVTNNMDNYRKLTREHAEIGPVVALYRAYVQTETDIASAHEMLADIEMKELAEQEIDDGKVRLQELELSLQTELLPKDPNDERNIFLEIRAGTGGDESALFSADLFRMYTRFAERQRWKVEIISESMSELGGYKEVILKIVGRGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVADVNLNPADLRIDTYRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQALSVLAARIKDKQLREIASKEAATRKSLIGSGDRSERIRTYNFPQGRITDHRINLTLYKIDAIMDGDLDELLSGLATEHQAELLAAMGE*