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RTP_03222018_0_2um_scaffold_560_25

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(26943..28286)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJY5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 427.0
  • Bit_score: 570
  • Evalue 1.40e-159
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 427.0
  • Bit_score: 570
  • Evalue 3.90e-160
Tax=RBG_16_Betaproteobacteria_58_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 433.0
  • Bit_score: 574
  • Evalue 1.00e-160

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Taxonomy

RBG_16_Betaproteobacteria_58_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGTCCATGACCACAAATATACTTAACCCAGCCACTCCACCCGCCACACTCACTATTACTTCAATTAATCACGAAGGGCGCGGTGTCGCGCGGCGCGAGGATGGGAAAACCATATTTGTCGATGGTGCACTTACTGGTGAAATCGTCAATTACTCGATTTACCGTAAAAAAGACAGCTTTGAGATGGCGCAAATTACCAAAATCGTTCGCCCCAGCTTTATGCGTGTTAAACCACGCTGTCCGCATTTCGGCGTCTGTGGTGGCTGTAGCTTACAACACATGGATGCGGGTGCGCAAATTGCTGCCAAGCAGCGCATACTGGAAGATAACTTAGTACATATAGGCAAAGTCCAACCCGCCAGCATTATGTCACCGATACATGGACCCGCTTGGGGTTATCGTACCCGCGCACGTATGTCAGTGCGGCTGGTGGAAAAAAAAGGCGGCGTATTGGTCGGTTTTCACGAGCGTAGAAACAGCTTTATTGCGGATATGAATTCGTGTGAGGTATTGCCACCGCGCATTTCCGCACTCATTCCGCTATTACGCGAATTTGTCATGCGCCTCACTATCCGTACACAATTACCGCAAATTGAAGTGGTCGCGACCGATGTCGTCGATGCCTTGGTGATTCGCCACATGGTGCCAATACCTCCTGAAGATGAAGTATTATTACGTGAATTTGCAGATCAGCACCACATTCAATGGTGGACGCAATCTAAAGGTCCTGACACCATTAAACCATTTTATCCGCTGGATGCGCCAACCCTCTCCTATAGTTTGCCTGAATTCAACTTGGTCATGCCTTTTCAACCGAGTGAATTCACCCAAATTAACACTGATGTGAACCCTATTCTTATGCGTCGCGCCATGCAGCTACTAGACCCACAACCGCACGAACGTATTGTTGATATGTTCTGTGGACTCGGAAATTTCACCTTGCCAATAGCACGCCACGCACACACGGTTGTGGGTATAGAAGGTAGTAAGGAATTAGTTGCTCGCGCACAACAAAATTCCACGTTTAACGGTATTAGCAATACTGAATTCTTGGTCGAAAATTTATTTGAAATGAGCACCGAGCGCATGAACGCCTTGGGGCACTTTGACAAGATGCTTATCGACCCACCCCGTGATGGCGCATTTTCACTGGTGCAGGCACTGGATGATAGTGCCCCCAAACGCATTATTTACGTTTCATGTAACCCTGCTACGCTGGCACGTGATGCGGCGGTGTTAGTACATGAGAAAGGCTATCTACTCAAAAGCGCAGGCATTGCCAATATGTTCCCACATACGGCGCATGTTGAGTCTATTGCCTGGTTTGAAAAACACTCGCTTTAG
PROTEIN sequence
Length: 448
MSMTTNILNPATPPATLTITSINHEGRGVARREDGKTIFVDGALTGEIVNYSIYRKKDSFEMAQITKIVRPSFMRVKPRCPHFGVCGGCSLQHMDAGAQIAAKQRILEDNLVHIGKVQPASIMSPIHGPAWGYRTRARMSVRLVEKKGGVLVGFHERRNSFIADMNSCEVLPPRISALIPLLREFVMRLTIRTQLPQIEVVATDVVDALVIRHMVPIPPEDEVLLREFADQHHIQWWTQSKGPDTIKPFYPLDAPTLSYSLPEFNLVMPFQPSEFTQINTDVNPILMRRAMQLLDPQPHERIVDMFCGLGNFTLPIARHAHTVVGIEGSKELVARAQQNSTFNGISNTEFLVENLFEMSTERMNALGHFDKMLIDPPRDGAFSLVQALDDSAPKRIIYVSCNPATLARDAAVLVHEKGYLLKSAGIANMFPHTAHVESIAWFEKHSL*