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RTP_03222018_0_2um_scaffold_3479_10

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 7618..9198

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKW8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 460.0
  • Bit_score: 313
  • Evalue 2.70e-82
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CCU63542.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 460.0
  • Bit_score: 313
  • Evalue 3.80e-82
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 464.0
  • Bit_score: 311
  • Evalue 3.80e-82

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
GTGAGTACAGCAAATAAATACACAATATACGGAGCACTGTTTGGGCTTTGCTTTCCGATATGCGCTCTCGTTCTGCTGTATTTTACGCAGCCTTACAGTACATGGGCCGACGTCCTCATGCATCAAACAGTTGAGCAACCGTTGATGCTGATGATAGCTACGGCACCCTTTTTTCTGGGTCTATTTGCTCGCTTTGGGGGTGCACGCCAAGACGACATAAATCATATTTTGAGCGGTTTAGAGCAGCAAGTTCAAGATAAAACCGAATCACTCCGTTTAGCACTGCAAGAATCAAAGCAAGCCAATGAGTTGATAGGAAACATGGCCAACCATGATGCGCTGACGGGGTTGTTCAACCGGCGTTATTTTCAAGGTGCTCTGGAAGCCTGGGTAAGCTATGCCACTCGCTATCATAGGTGTGGTGCCTTGTTATTTATTGATTTGGACAAATTTAAATACGTCAACGACACTTACGGGCATAAGTTTGGGGATCAGTACTTAAACGATATTGCCAATTTACTCATGGAAAATCTGCGCACCACTGATATTGTTGCTCGCTGGGGTGGGGATGAATTTATTCTGTTTTTACCAGAAACAACAGGGGCCGACGCACACCTCGTTGGCACTAAATTAATGACGTCTTTCACAGAGTGTAGTTTGCGTTTTAACACTGAGATATTTCACCCATCCGCTAGCATCGGCATCGCGCTGTTCCCAGATCACGCCATCACTGCTGATGACATGATCTTATTTGCCGATGCCGCAATGTACGAAGCAAAAAAAGCCGGACGTGGATGTTGGCGTTTATATGGCGCAACGGCCCCCGAAGTGGAGCATACCCAGGCGCACTTACAGTGGGGTGCCCGTATTCGGCGTGCTTTAGAAAATGATCAATTTCTGTTGCTTTATCAGCCACTATTAAACCTCAAGTCAGGTAAAACTATGGGCTACGAGGCGTTATTAAGGCTGGAGGATGTGACGGGGCAACTGATTAGCCCAGGTCAGTTTCTGGCATCAGCTGAGCGCGCCAACTTAAGCACAGACCTTGATATGATGGCCATCAGAAAAGCGGCTCGCCGTGTCATGCATACCGACACATTGGAAATATCGATTAACTTATCCAGCAAAACGCTACTTGACCCCTCATTAATTACTAAAATCACCAGAATTTTGCAAGAGCATCCTGGGCTGCAACATAAGCTCCGTTTTGAAATCGCCGAAGCAACTGCACTGCAGAATTTGACTTTGGTCAGAACCGCTTCTGCCAAAATCAAGGCTTTGGGATGTGCATTAACGTTGGATGATTTTGGCTTAGGACCGACTTCTATGCATCATCTGGGATTATTATCGATTGATATGGTAAAAATCCACCCTAGTTTGACGCGGGATCTCATGAGTGACCCAGACAGCCTTATATTTGTCAAAAATCTCACAGAGATGTTGCATGGATTTCAGCTTCAAGTGGGTGCAAAGTCCATAGAAGATCCACAGCTACTGGAGATGTTGCGTAACATAGGGATGGACTATGCTCAAGGCTTTGCCATAGGCAAGCCATTAGAATCCTTGGAACGTATTGATTGA
PROTEIN sequence
Length: 527
VSTANKYTIYGALFGLCFPICALVLLYFTQPYSTWADVLMHQTVEQPLMLMIATAPFFLGLFARFGGARQDDINHILSGLEQQVQDKTESLRLALQESKQANELIGNMANHDALTGLFNRRYFQGALEAWVSYATRYHRCGALLFIDLDKFKYVNDTYGHKFGDQYLNDIANLLMENLRTTDIVARWGGDEFILFLPETTGADAHLVGTKLMTSFTECSLRFNTEIFHPSASIGIALFPDHAITADDMILFADAAMYEAKKAGRGCWRLYGATAPEVEHTQAHLQWGARIRRALENDQFLLLYQPLLNLKSGKTMGYEALLRLEDVTGQLISPGQFLASAERANLSTDLDMMAIRKAARRVMHTDTLEISINLSSKTLLDPSLITKITRILQEHPGLQHKLRFEIAEATALQNLTLVRTASAKIKALGCALTLDDFGLGPTSMHHLGLLSIDMVKIHPSLTRDLMSDPDSLIFVKNLTEMLHGFQLQVGAKSIEDPQLLEMLRNIGMDYAQGFAIGKPLESLERID*