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RTP_02272018_0_2um_scaffold_1017

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1017_1
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
adenylate/guanylate cyclase with GAF and PAS/PAC sensors (EC:4.6.1.2)
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors {ECO:0000313|EMBL:AFZ09371.1}; EC=4.6.1.2 {ECO:0000313|EMBL:AFZ09371.1};; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VN42_9CYAN
RTP_02272018_0_2um_scaffold_1017_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1140..1715)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035DDAFD
response regulator receiver:ANTAR
Tax=RBG_16_Betaproteobacteria_66_20_curated
RTP_02272018_0_2um_scaffold_1017_3
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1725..2087)
DNA (363bp) protein (121aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T0V1_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90431.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_1017_4
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2084..3028)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003649E3C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK48246.1}; TaxID=407976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS223).;"
RTP_02272018_0_2um_scaffold_1017_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3039..3368)
DNA (330bp) protein (110aa)
NAD(P)H-dependent nitrite reductase, small subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGR6_AZOSU
NAD(P)H-dependent nitrite reductase, small subunit
NAD(P)H-dependent nitrite reductase, small subunit {ECO:0000313|EMBL:AEV26202.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
RTP_02272018_0_2um_scaffold_1017_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3387..5816)
DNA (2430bp) protein (810aa)
assimilatory nitrite reductase (NAD(P)H) large subunit (EC:1.7.1.4)
Nitrite and sulfite reductase iron-sulfur/siroheme-binding site id=1362112 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1017_7
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5951..6703)
DNA (753bp) protein (251aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000381FD35
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EGK71299.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
uroporphyrin-III C-methyltransferase
RTP_02272018_0_2um_scaffold_1017_8
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6714..7697)
DNA (984bp) protein (328aa)
glycosyl transferase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003753B7E
glycosyl transferase
Tax=BJP_IG2103_Dechloromonas_60_92
RTP_02272018_0_2um_scaffold_1017_9
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7694..10423)
DNA (2730bp) protein (910aa)
nitrate reductase subunit alpha n=1 Tax=Methylophilus RepID=UPI00037753AB
molybdopterin oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
RTP_02272018_0_2um_scaffold_1017_10
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10557..10811)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036A99C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC72476.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
RTP_02272018_0_2um_scaffold_1017_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11046..11654)
DNA (609bp) protein (203aa)
putative outer membrane lipoprotein id=12493296 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
17 kDa surface antigen
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1017_12
unknown

Not on your lists

comp(11697..11960)
DNA (264bp) protein (88aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1017_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12066..12545)
DNA (480bp) protein (160aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABE8_9PROT
moaC; molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_1017_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12585..14018
DNA (1434bp) protein (478aa)
Peptidase M48, Ste24p n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1T9_9PROT
Peptidase M48 {ECO:0000313|EMBL:GAO35048.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
peptidase M48, Ste24p
RTP_02272018_0_2um_scaffold_1017_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14238..14609
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5A75
monoheme cytochrome SoxX
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1017_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14631..15092
DNA (462bp) protein (154aa)
transmembrane protein id=12497727 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1017_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15138..15452
DNA (315bp) protein (105aa)
sulfur oxidation protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F3BCA
sulfur compound chelating protein SoxZ
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1017_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15539..16369
DNA (831bp) protein (277aa)
diheme cytochrome SoxA id=12497729 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diheme cytochrome SoxA
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_1017_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16550..18265
DNA (1716bp) protein (572aa)
Probable sulfur oxidation signal protein, twin-arginine translocation pathway id=1345670 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfate thiol esterase SoxB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1017_20
unknown

Not on your lists

comp(18336..18437)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 20 items

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