name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_1057_1
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..599)
|
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z704_9NEIS
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
|
|
RTP_02272018_0_2um_scaffold_1057_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(592..1131)
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9S6_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34625.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_02272018_0_2um_scaffold_1057_3
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1128..1574)
|
NUDIX hydrolase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ29_SIDLE
Phosphatase NudJ {ECO:0000313|EMBL:GAO32389.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
NUDIX hydrolase
|
|
RTP_02272018_0_2um_scaffold_1057_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1692..1955)
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABB5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO34966.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_1057_5
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2057..2617)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Pseudouridine synthase n=2 Tax=Methylovorus RepID=C6X9L8_METSD
rsuA; pseudouridine synthase
|
|
RTP_02272018_0_2um_scaffold_1057_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2652..3893
|
icd; isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Q7_9PROT
|
|
RTP_02272018_0_2um_scaffold_1057_7
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3998..4201)
|
Cold-shock DNA-binding protein family n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AEG3_NITEC
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABI60269.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
|
|
RTP_02272018_0_2um_scaffold_1057_8
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4446..4748
|
ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Pseudogulbenkiania RepID=G2IXV2_PSEUL
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
|
|
RTP_02272018_0_2um_scaffold_1057_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4749..7007
|
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:BAN34635.1}; EC=3.4.21.92 {ECO:0000313|EMBL:BAN34635.1};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9S8_9PROT
|
|
RTP_02272018_0_2um_scaffold_1057_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7126..9360)
|
diguanylate cyclase/phosphodiesterase id=12495183 bin=THIO_HI species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_1057_11 |
Not on your lists |
comp(9368..9613)
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTQ9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10631.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_1057_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9636..10751)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKE3_THIDA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
RTP_02272018_0_2um_scaffold_1057_13 |
Not on your lists |
comp(10753..11424)
|
helicase-associated endonuclease for fork-structured DNA (EC:2.7.7.-)
ERCC4 n=1 Tax=mine drainage metagenome RepID=E6QTQ8_9ZZZZ
ERCC4 {ECO:0000313|EMBL:CBI10630.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
|
RTP_02272018_0_2um_scaffold_1057_14
unknown
|
Not on your lists |
11485..11868
|
This feature has no annotations |
|
RTP_02272018_0_2um_scaffold_1057_15 |
Not on your lists |
11921..12988
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QUH9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10902.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
3-deoxy-D-manno-octulosonic-acid transferase
|
|
RTP_02272018_0_2um_scaffold_1057_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12992..13330
|
hypothetical protein id=12496949 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96754.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_1057_17
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13362..13898
|
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8K7_METSD
N-acetyl-anhydromuranmyl-L-alanine amidase
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ACT49477.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
|
|
RTP_02272018_0_2um_scaffold_1057_18 |
Not on your lists |
comp(14037..15692)
|
DNA repair protein RecN (Recombination protein N) n=1 Tax=mine drainage metagenome RepID=E6QUI2_9ZZZZ
DNA repair protein RecN (Recombination protein N) {ECO:0000313|EMBL:CBI10905.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA repair protein RecN
|
|
RTP_02272018_0_2um_scaffold_1057_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15692..16564)
|
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V1_9PROT
|
|
RTP_02272018_0_2um_scaffold_1057_20
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16628..17647
|
Heat-inducible transcription repressor hrcA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJP5_9PROT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
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