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RTP_02272018_0_2um_scaffold_1060

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1060_1
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1346
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000347D070
Rhs element Vgr protein {ECO:0000313|EMBL:ELX08957.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
VGR-related protein
RTP_02272018_0_2um_scaffold_1060_2
unknown

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1339..1875
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003679CA7
RTP_02272018_0_2um_scaffold_1060_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1872..3725
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036CA72D
Uncharacterized protein {ECO:0000313|EMBL:KKC62288.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1060_4
unknown

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3729..4331
DNA (603bp) protein (201aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1060_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4407..4784
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HR91_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL44079.1}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
RTP_02272018_0_2um_scaffold_1060_6

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comp(4979..7561)
DNA (2583bp) protein (861aa)
Protein disaggregation chaperone n=1 Tax=mine drainage metagenome RepID=E6QQZ2_9ZZZZ
Protein disaggregation chaperone {ECO:0000313|EMBL:CBI09663.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ATP-dependent chaperone ClpB
RTP_02272018_0_2um_scaffold_1060_7

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7709..8545
DNA (837bp) protein (279aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) (Quinolinate phosphoribosyltransferase (Decarboxylating)) (QAPRTase) {ECO:0000313|EMBL:CBI10702.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBI10702.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) (Quinolinate phosphoribosyltransferase (Decarboxylating)) (QAPRTase) n=1 Tax=mine drainage metagenome RepID=E6QTY0_9ZZZZ
RTP_02272018_0_2um_scaffold_1060_8

Not on your lists

8542..9555
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTY1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
RTP_02272018_0_2um_scaffold_1060_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9552..10955
DNA (1404bp) protein (468aa)
Outer membrane component of tripartite multidrug resistance system n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ADJ1_COLFT
RND efflux system
RND efflux system {ECO:0000313|EMBL:AIY43409.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
RTP_02272018_0_2um_scaffold_1060_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10948..12045
DNA (1098bp) protein (366aa)
RND transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003478B00
Efflux transporter RND family, MFP subunit {ECO:0000313|EMBL:EZP41945.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
RND family efflux transporter MFP subunit
RTP_02272018_0_2um_scaffold_1060_11
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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12049..15117
DNA (3069bp) protein (1023aa)
Acriflavin resistance protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PYY4_9RHOO
acrB; acriflavin resistance protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_02272018_0_2um_scaffold_1060_12
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15151..16428
DNA (1278bp) protein (426aa)
Metal dependent phosphohydrolase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RR73_ALLVD
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADC61901.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
RTP_02272018_0_2um_scaffold_1060_13
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16425..18836
DNA (2412bp) protein (804aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBM5_THIV6
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
RTP_02272018_0_2um_scaffold_1060_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18931..19323)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000380777F
Topoisomerase {ECO:0000313|EMBL:GAO36037.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
competence protein ComEA helix-hairpin-helix repeat protein
RTP_02272018_0_2um_scaffold_1060_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19447..20595)
DNA (1149bp) protein (383aa)
Aldo/keto reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUC0_THISH
aldo/keto reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_02272018_0_2um_scaffold_1060_16
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20592..21764)
DNA (1173bp) protein (391aa)
Histone deacetylase superfamily n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUC2_THISH
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:ACL73242.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_02272018_0_2um_scaffold_1060_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21754..22200)
DNA (447bp) protein (149aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000361FDCA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 17 items

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