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RTP_02272018_0_2um_scaffold_2061

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_2061_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..772
DNA (771bp) protein (257aa)
Transcriptional regulator, MerR family n=1 Tax=Azoarcus sp. KH32C RepID=H0Q6B8_9RHOO
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:BAL27531.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
RTP_02272018_0_2um_scaffold_2061_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(769..3897)
DNA (3129bp) protein (1043aa)
Cu(I)/Ag(I) efflux system membrane protein CusA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZJ8_DELAC
cation transporter
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
RTP_02272018_0_2um_scaffold_2061_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3894..5123)
DNA (1230bp) protein (410aa)
RND transporter n=1 Tax=Nevskia ramosa RepID=UPI0003B42406
RND family efflux transporter MFP subunit
Tax=CG_Hydro_01
RTP_02272018_0_2um_scaffold_2061_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5120..6349)
DNA (1230bp) protein (410aa)
Outer membrane efflux protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSX8_9BURK
outer membrane efflux protein
Tax=CG_Hydro_01
RTP_02272018_0_2um_scaffold_2061_5
unknown

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comp(6420..6815)
DNA (396bp) protein (132aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_2061_6
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7101..8417
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FCA5D8
sensory box protein
Sensory box protein {ECO:0000313|EMBL:CDG81917.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
RTP_02272018_0_2um_scaffold_2061_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8423..9067
DNA (645bp) protein (215aa)
DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXZ5_JANMA
citB2; LuxR family transcriptional regulator
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ABR89925.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_2061_8
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9243..10820
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWU6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGF32925.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_2061_9
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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11059..11775
DNA (717bp) protein (239aa)
Flagellin domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF12_GALCS
flagellin domain-containing protein
Tax=GWA2_Gallionellales_54_124_curated
RTP_02272018_0_2um_scaffold_2061_10
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12180
DNA (339bp) protein (113aa)
Putative flagellar protein FlaG n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SII4_THIDA
flagellar protein FlaG
Tax=GWA2_Gallionellales_60_18_curated
RTP_02272018_0_2um_scaffold_2061_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12195..13610
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C7B24
flagellar hook-associated 2 domain protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_2061_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13752..14228
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037116C1
Flagellar protein FliS {ECO:0000313|EMBL:KFC69108.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flagellar biosynthesis repressor
RTP_02272018_0_2um_scaffold_2061_13
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14233..14571
DNA (339bp) protein (113aa)
FliT flagellar protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXY9_JANMA
fliT; FliT flagellar protein
FliT flagellar protein {ECO:0000313|EMBL:ABR88810.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_2061_14
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..15594
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W4B1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGF30310.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_2061_15
unknown

Not on your lists

15591..15722
DNA (132bp) protein (44aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_2061_16
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15756..16505
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302202F
pilZ domain protein
Flagellar brake protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Displaying 16 items

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