ggKbase home page

RTP_02272018_0_2um_scaffold_962_10

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(9665..10675)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein OmpA (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QPU7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 343.0
  • Bit_score: 325
  • Evalue 5.80e-86
Putative outer membrane protein OmpA (Modular protein) {ECO:0000313|EMBL:CBI09268.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 343.0
  • Bit_score: 325
  • Evalue 8.10e-86
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 340.0
  • Bit_score: 265
  • Evalue 1.50e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1011
ATGTCCCGTACTTTACGTAACCTCGTTGCTATTTCTTGCGTACTAATGGCTGGCTCAGCCGTTGCTGCTGAAATGGACACGCGTACCTACATCGCCCCTAGTGTTAATTACACCATGACTGACAACGACTGGGGTGTTGATGACGGGTTTGGCTTTGGTATTGCGGTCGGCAAACCTGTTTCTAAAAGCTTCAACCTAGAGTTAAACGCTAATTACGCATCGCATAGCCCAAATAACGGTAGCAACGTTGTAGGTAACTTGCAAAATATCGGTTTGAGCGTTGATGCTTTGTATTTCTTCAACCGCAATCCTGATTTTGCCCCATACTTGGTTGCTGGTATTGGCGCTTTGGATAGCCGCGCTCCTGGCTTCAGTGAAACTAACTTCGCTGCTAACGCAGGTATCGGTTTCATGAAAATGTTTAATGGCGTAGGTGTGCGTTCTGACGTACGTTATCGTTATACAGACAATGTAAGCACTAACCCTAGCTTCAACCCAGGTGACTGGATTATAAGTGCTGGTCTTGTGATTCCACTAGGCGCAGCACCTGTTGCACCTGTTCCAGTAGCGGCACCAGCGCCAGCACCGGCTCCAGCACCTTATGTTGCGCCAGCTCCAGCGCCAGCGCCTTATGTTGCACCAGCGCCAGCACCGGCTCCAGCGCCACACGTAATCATCAAACTGGAAGGTACACACTTCGATTTCGATAAAGCCACTTTACGCCCTACAGGCAAGGCTAAATTAGATGACAACGCAGTTGTGTTGAAAGATCATCCAGAAATCATGGTAGACATCACTGGCTATACCGACAGTGTTGGTACAGCTGCTTACAACAAAAAATTGTCTGCAAAACGTGCGGCCACCGTTAAAAAATACTTAGAATCTAAAGGTATTGCGGCTGATCGTATGACTGCTAAAGGCATGGGTGAAGCAAACCCAGTTGCAAGCAACAAAACTAAAGCAGGTCGCGCTGAAAACCGTCGTGTTGAGTTGGATGAACACACCAAGTAA
PROTEIN sequence
Length: 337
MSRTLRNLVAISCVLMAGSAVAAEMDTRTYIAPSVNYTMTDNDWGVDDGFGFGIAVGKPVSKSFNLELNANYASHSPNNGSNVVGNLQNIGLSVDALYFFNRNPDFAPYLVAGIGALDSRAPGFSETNFAANAGIGFMKMFNGVGVRSDVRYRYTDNVSTNPSFNPGDWIISAGLVIPLGAAPVAPVPVAAPAPAPAPAPYVAPAPAPAPYVAPAPAPAPAPHVIIKLEGTHFDFDKATLRPTGKAKLDDNAVVLKDHPEIMVDITGYTDSVGTAAYNKKLSAKRAATVKKYLESKGIAADRMTAKGMGEANPVASNKTKAGRAENRRVELDEHTK*