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RTP_02272018_0_2um_scaffold_1055_18

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 13954..15858

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD (Sigma-70) n=1 Tax=mine drainage metagenome RepID=E6QWG8_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 623.0
  • Bit_score: 1005
  • Evalue 1.40e-290
RNA polymerase sigma factor rpoD (Sigma-70) {ECO:0000313|EMBL:CBI11591.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 623.0
  • Bit_score: 1005
  • Evalue 1.90e-290
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 633.0
  • Bit_score: 928
  • Evalue 6.10e-268

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1905
ATGGCGATAGACCAAGACAAAATTGACGTTAAACAAACCGATGCAGAAATACGTCGATCCCGCCTTAAGAATCTGATTATATTAGGTAAAGAGCGTGGTTATCTGACCTACTCTGAAATCAACGATCATCTGCCTGATGATATGTTGGATGCCGAGCAGATCGAGGGCGTGGTAGGCATGATTAACGACATGGGCATACAGGTCTATGACGAAGCGCCCGATGCCGAAGCGTTATTGATGTCCGATGCCGCGCCAGCGGTGACGGATGAGGATGCAGTTGCTGAAGCCGAGGCGGCATTATCAACGGTAGATTCTGAGTTTGGTCGTACGACTGACCCTGTGCGTATGTACATGCGCGAAATGGGAACGGTGGAGTTGCTCACGCGTGAAGGCGAAATTGTCATTGCCAAGCGCATAGAAGAGGGCTTGCGCAATATGGTGCAAGCTATTTCTGCATGTCCTGTGACCATAGATCAAATTTTATCACTGGTGGACAAAGTCGAGCGTGATGAAATCAAAATTGATGATTTTGTCGACGGTATCGTTGCCACTGAAGCCGAATTGGAAGCCGCTGCCCTCGCTGCTGCTGCTATGCCGATTGAGGAAGAAAGTGCTGAATTAGATATTGAATCTGAAGATGACGAAGAGGAAGATGATGGCAGCGCAATGGCGGCTGCTAATCTCGCCCAACTCAAAGCCGATGCGATGGAGCGTTTTGAAATACTGCGCAAACTCGTCAAGCGTATGCAAGCTGCTCAAAAGAAATACGGCTACGCCAGTAAGCAATATAACGAGCTCCAAGTTGATGTATCCAATGTTTTGCTGGAAATCCGTTTCTCAGCCAAACAAGTTGAATCACTATGTAATCTGATACGTGAGATGGTGGAAACTGTCCGCACCCACGAACGCGAAATCATGGATGTTGTGGTACGTCGTTCGGGCATGCCACGCGATCATTTCATTAAAGTATTCCCTGGTCATGAAACCAATTTGGATTGGTTAGGCGAGCAAATTGCGACCAAAAAAACGTATGTTGAACACTTGGTTCGTCATCAGTACACCATTTTAGAGCGTCAAAATAGCCTAATTTCATTGCAAGACAAGATTGGTATTCCTATCAAGGATTTGAAGGAAATCAATCGCCAAATGACAGCGGGTGAAAAGCGTACGCTGATGGCCAAGCGTGAAATGATAGAAGCTAACTTGCGCTTAGTAATTTCTATTGCTAAAAAATATACCAATCGCGGGTTACAGTTTTTGGATTTGATACAAGAAGGTAACATCGGCTTGATGAAAGCCGTGGATAAATTCGAGTATCGTCGTGGTTATAAATTTTCTACTTATGCAACATGGTGGATACGTCAAGCAATTACCCGTTCTATCGCCGATCAAGCGCGGACGATACGTATTCCTGTGCACATGATAGAAACCATCAATAAGATGAATCGTATCGCACGGCAAATCCTGCAAGAAACAGGACAAGAGCCTGATCCATCCGTGTTGGCAGAAAAAATGGAAATGCCAGAGGAAAAAATCCGTAAAATCCTCAAAATTTCCAAAGAACCTATTTCTATGGAAACACCTATCGGCGATGATGAAGATTCACATTTAGGTGACTTTATCGAAGATACTTCAACCTTGGCGCCTATGGATGCGGCGATTTACGACAGTTTGCAAGATGTCACCAAGGAAATCCTTGATGGGTTAACCCAACGCGAAGCCAAAGTGTTGCGTATGCGTTTTGGTATCGAAATGAACACGGATCACACGTTGGAAGAGGTGGGTAAGCAGTTCGATGTCACGCGTGAACGTATACGCCAAATTGAAGCTAAAGCTTTGCGTAAATTGCGTCATCCGTCACGCTCAGACCGGCTTAAGAGTTTTATTGACAACGGTAGCCAATAA
PROTEIN sequence
Length: 635
MAIDQDKIDVKQTDAEIRRSRLKNLIILGKERGYLTYSEINDHLPDDMLDAEQIEGVVGMINDMGIQVYDEAPDAEALLMSDAAPAVTDEDAVAEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIVIAKRIEEGLRNMVQAISACPVTIDQILSLVDKVERDEIKIDDFVDGIVATEAELEAAALAAAAMPIEEESAELDIESEDDEEEDDGSAMAAANLAQLKADAMERFEILRKLVKRMQAAQKKYGYASKQYNELQVDVSNVLLEIRFSAKQVESLCNLIREMVETVRTHEREIMDVVVRRSGMPRDHFIKVFPGHETNLDWLGEQIATKKTYVEHLVRHQYTILERQNSLISLQDKIGIPIKDLKEINRQMTAGEKRTLMAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRIARQILQETGQEPDPSVLAEKMEMPEEKIRKILKISKEPISMETPIGDDEDSHLGDFIEDTSTLAPMDAAIYDSLQDVTKEILDGLTQREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDRLKSFIDNGSQ*