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RTP_02272018_0_2um_scaffold_531_36

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(27073..27270)

Top 3 Functional Annotations

Value Algorithm Source
AlpA family transcriptional regulator n=1 Tax=Geovibrio thiophilus RepID=UPI0003B5F5AE similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 54.0
  • Bit_score: 55
  • Evalue 1.30e-05
prophage cp4-57 regulatory similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 60.0
  • Bit_score: 55
  • Evalue 6.10e-06
Prophage CP4-57 regulatory {ECO:0000313|EMBL:ADU34887.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 60.0
  • Bit_score: 55
  • Evalue 3.00e-05

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGGAAACCTCGTTCAGAATTAAAGAGTTATGCGGATACGTGCGCTTGTCAAAATCGACCATTTATTTGGAAGTTAAAAGTGGAAAATTTCCGCCGGCTATCAAATTAACAGAAAAAACAAGCATCTGGCTTAAATCTGACATTGACGCATGGTTCAAATCAAAAGTTGAATCGGCAAAAAATGGAGGTGTGTTATGA
PROTEIN sequence
Length: 66
METSFRIKELCGYVRLSKSTIYLEVKSGKFPPAIKLTEKTSIWLKSDIDAWFKSKVESAKNGGVL*