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RTP_02272018_0_2um_scaffold_1523_3

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 1909..2913

Top 3 Functional Annotations

Value Algorithm Source
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDS52828.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 337.0
  • Bit_score: 463
  • Evalue 1.90e-127
NlpA lipoprotein id=1279047 bin=GWE1_Burkholderiales_65_30 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 319.0
  • Bit_score: 455
  • Evalue 2.80e-125
NlpA lipoprotein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 320.0
  • Bit_score: 432
  • Evalue 7.20e-119

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Taxonomy

Polaromonas sp. CG9_12 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGTCAATATCACCATCGCTTAAGAAAATCTGTATTGCTACTATGATGCTAGTCGCAGCTGGCACAAACGCTACTGCAGCGCAGGCGGCAACAACCTCCATGAAAATCGGCACTGTCGTATGGATAGGCTACGGACCATTTTTTGTTGCCGACGCAAAAAATATATACAAGAAACACGATCTTAAAGTCACGCTGCAAATGTTTGCCGACCCTGCCCTTATTCCTACAGCAATGGCAAGCCGTTCAATTGACGGTGGGATGTTGACTTACGATCAGGTTATCGGCTCTAGCGCTAAAGGTTTGGCGCACAAAGTAGTCATGCCTATTGACTACTCGAATGGCGGTGACGCGATTGTAGCTACCAGTGCTATTACTAAAGTCAGCGATTTCAAAGGCAAAAAAATTGGTTTTAACCCGTTATCCCCATCAGATTTTTTACTTTCGTATGCGCTGAAGAAGAATGGCTTAACCGATAAAGACTATGAAATGGTCCCCATGACACCAGAAGCTGTGCCAGCCGCCATGGTTTCGGGCGGGATTCCTATTGGTGTCACCTATGAACCCAGTCTTTCGCAAATCCTCAGCCTCGGTGGCGGCAAAAAATTTCACGTTGTATTTTCTTCCAAAGACGCGCCTGGTTTAATTGCTGATGTGCTGGTATTCGATCAAAAATATATACAAGCACACCCCAAGGAAATCAAAGGTCTGATTGAATCCTATTTAGAAGGTATGGCTTATATGAAAGCCCATCCGGATGAATCAGCGAAAATTATCGGCAAAGCCATGGGAGTAAGTGGTAAGGAAGCAATGGCGCAGATGAGTGGTGTTTACAACATACCCTTAGCCGAGATGCCTAAAGCTTTTGTGAAATCTGCTGAGACGACTTCTTATTACGCCAGTGGTGAAGTCATCGGTAATATCCTCAAAAACAAAGGACAAATTAAAACTATACCCGCGACTGAAACGACTATCGACAGCCAATTCGTTAATTCGCTGGTTAAATAA
PROTEIN sequence
Length: 335
MSISPSLKKICIATMMLVAAGTNATAAQAATTSMKIGTVVWIGYGPFFVADAKNIYKKHDLKVTLQMFADPALIPTAMASRSIDGGMLTYDQVIGSSAKGLAHKVVMPIDYSNGGDAIVATSAITKVSDFKGKKIGFNPLSPSDFLLSYALKKNGLTDKDYEMVPMTPEAVPAAMVSGGIPIGVTYEPSLSQILSLGGGKKFHVVFSSKDAPGLIADVLVFDQKYIQAHPKEIKGLIESYLEGMAYMKAHPDESAKIIGKAMGVSGKEAMAQMSGVYNIPLAEMPKAFVKSAETTSYYASGEVIGNILKNKGQIKTIPATETTIDSQFVNSLVK*