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RTP_07252018_0_1um_scaffold_3537

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_3537_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..928)
DNA (927bp) protein (309aa)
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:AEV99860.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AEV99860.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Isoquinoline 1-oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM87_NIAKG
Isoquinoline 1-oxidoreductase
RTP_07252018_0_1um_scaffold_3537_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(930..1397)
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0S8_EMTOG
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:AFK05531.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
RTP_07252018_0_1um_scaffold_3537_3

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comp(1788..2603)
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BH98_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM15876.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AraC family transcriptional regulator
RTP_07252018_0_1um_scaffold_3537_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2715..3278
DNA (564bp) protein (188aa)
nodulation protein L n=1 Tax=Segetibacter koreensis RepID=UPI0003810CD3
nodulation protein L
Nodulation protein L {ECO:0000313|EMBL:AHF14312.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_07252018_0_1um_scaffold_3537_5
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3333..3809
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037F6E4A
Cupin {ECO:0000313|EMBL:KGE87593.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
cupin
RTP_07252018_0_1um_scaffold_3537_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3834..4229
DNA (396bp) protein (132aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QCJ1_SPILD
cupin
Cupin {ECO:0000313|EMBL:AKD55487.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
RTP_07252018_0_1um_scaffold_3537_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4329..5117)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWC0_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK03973.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
RTP_07252018_0_1um_scaffold_3537_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5083..5535)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWC1_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK03974.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
RTP_07252018_0_1um_scaffold_3537_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(5700..6152)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B53763
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
RTP_07252018_0_1um_scaffold_3537_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6350..6967
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQ56_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3537_11
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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7121..7543
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=3431543 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
RTP_07252018_0_1um_scaffold_3537_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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7688..8116
DNA (429bp) protein (143aa)
Hypothetical membrane protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZGW8_BREBN
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

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