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RTP_07252018_0_1um_scaffold_5357

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_5357_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW02859.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AEW02859.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK6_NIAKG
3-hydroxybutyryl-CoA dehydrogenase
RTP_07252018_0_1um_scaffold_5357_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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502..1164
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003651308
regulatory protein MerR
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1450..2538)
DNA (1089bp) protein (363aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK4_NIAKG
mechanosensitive ion channel MscS
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2813..3571)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361DE38
metallophosphoesterase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3568..3999)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A005
Uncharacterized protein {ECO:0000313|EMBL:KIC96074.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_5357_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4015..4479)
DNA (465bp) protein (155aa)
lactate utilization protein B/C n=1 Tax=Niabella aurantiaca RepID=UPI0003638C90
lactate utilization protein B/C
Lactate utilization protein B/C {ECO:0000313|EMBL:AHF16048.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_07252018_0_1um_scaffold_5357_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4479..6512)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003817E86
membrane protease FtsH catalytic subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6606..7010)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367A469
iojap family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7119..7877
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366A2CF
biotin--acetyl-CoA-carboxylase ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7870..8652)
DNA (783bp) protein (261aa)
hisitidine kinase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5D0E7
Two-component system response regulatory protein, LytTR family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_5357_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8704..10371)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B2EA28
putative sensor protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

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